RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 ZNF765Q7L2R6 523 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 TMC3Q7Z5M5 1100 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 LURAP1LQ8IV03 231 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 RASGEF1CQ8N431 466 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 SFRP1Q8N474 314 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 PRELID2Q8N945 189 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 GLIS1Q8NBF1 620 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 CLEC18CQ8NCF0 446 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 GPR26Q8NDV2 337 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 SLC37A2Q8TED4 501 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 ABHD17AQ96GS6 310 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 AHCYL2Q96HN2 611 aaKnown RBP8.58□□□□□ -1.04
COPB1-210ENST00000533533 WDR24Q96S15 920 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 SLC38A3Q99624 504 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 CTRCQ99895 268 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 EFHD1Q9BUP0 239 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 MFRPQ9BY79 579 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 TRABDQ9H4I3 376 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 ETNK1Q9HBU6 452 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 ARFGAP3Q9NP61 516 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 DRG1Q9Y295 367 aaKnown RBP8.58□□□□□ -1.04
COPB1-210ENST00000533533 ARL5AQ9Y689 179 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 DOPEY1Q5JWR5 2465 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 TRBV23OR9-2A0A075B6M9 112 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 LOC101059948A0A1B0GTJ6 334 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 CCDC78A2IDD5 438 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 A8MU76 341 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 FADS2P1A8MWK0 482 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 SLC25A14O95258 325 aaPredicted RBP8.57□□□□□ -1.04
COPB1-210ENST00000533533 CRTAMO95727 393 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 AP2A1O95782 977 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 EML2O95834 649 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 APRTP07741 180 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 LPOP22079 712 aaPredicted RBP8.57□□□□□ -1.04
COPB1-210ENST00000533533 OAS2P29728 719 aaKnown RBP8.57□□□□□ -1.04
COPB1-210ENST00000533533 CASQ1P31415 396 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 RPL22P35268 128 aaKnown RBP8.57□□□□□ -1.04
COPB1-210ENST00000533533 ADRA1AP35348 466 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 SPAM1P38567 509 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 PPM1FP49593 454 aaPredicted RBP8.57□□□□□ -1.04
COPB1-210ENST00000533533 MC1RQ01726 317 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 ABHD18Q0P651 414 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 CDC20Q12834 499 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 PTPRCAPQ14761 206 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 POU6F1Q14863 301 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.57□□□□□ -1.04
COPB1-210ENST00000533533 ZNF648Q5T619 568 aaPredicted RBP8.57□□□□□ -1.04
COPB1-210ENST00000533533 HENMT1Q5T8I9 393 aaKnown RBP8.57□□□□□ -1.04
COPB1-210ENST00000533533 DRICH1Q6PGQ1 229 aaPredicted RBP8.57□□□□□ -1.04
COPB1-210ENST00000533533 CCDC137Q6PK04 289 aaKnown RBP8.57□□□□□ -1.04
COPB1-210ENST00000533533 FAM151BQ6UXP7 276 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 RANBP10Q6VN20 620 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 TIPARPQ7Z3E1 657 aaKnown RBP8.57□□□□□ -1.04
COPB1-210ENST00000533533 LINC00523Q86TU6 105 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 NLRP8Q86W28 1048 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 GALNT13Q8IUC8 556 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 UNC5BQ8IZJ1 945 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 TTC30BQ8N4P2 665 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 OR52K1Q8NGK4 314 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 ACTRT1Q8TDG2 376 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 APOBEC4Q8WW27 367 aaKnown RBP8.57□□□□□ -1.04
COPB1-210ENST00000533533 EID2BQ96D98 161 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 TRIM44Q96DX7 344 aaPredicted RBP8.57□□□□□ -1.04
COPB1-210ENST00000533533 ZPBPQ9BS86 351 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 ZSCAN5AQ9BUG6 496 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 KRTAP3-3Q9BYR6 98 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 KRTAP3-2Q9BYR7 98 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 TRIT1Q9H3H1 467 aaKnown RBP8.57□□□□□ -1.04
COPB1-210ENST00000533533 SARS2Q9NP81 518 aaKnown RBP8.57□□□□□ -1.04
COPB1-210ENST00000533533 FBXO8Q9NRD0 319 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.57□□□□□ -1.04
COPB1-210ENST00000533533 ZNHIT2Q9UHR6 403 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 TTC7AQ9ULT0 858 aaPredicted RBP8.57□□□□□ -1.04
COPB1-210ENST00000533533 MAN2B2Q9Y2E5 1009 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 TMEM184BQ9Y519 407 aaPredicted RBP8.57□□□□□ -1.04
COPB1-210ENST00000533533 SAR1BQ9Y6B6 198 aa8.57□□□□□ -1.04
COPB1-210ENST00000533533 ZNF106Q9H2Y7 1883 aaKnown RBP8.57□□□□□ -1.04
COPB1-210ENST00000533533 SHANK1Q9Y566 2161 aa8.56□□□□□ -1.04
COPB1-210ENST00000533533 GLYATL1P3A0A0U1RQE8 302 aa8.56□□□□□ -1.04
COPB1-210ENST00000533533 PHF2O75151 1096 aa8.56□□□□□ -1.04
COPB1-210ENST00000533533 MTX2O75431 263 aa8.56□□□□□ -1.04
COPB1-210ENST00000533533 STK17BO94768 372 aa8.56□□□□□ -1.04
COPB1-210ENST00000533533 KRT14P02533 472 aa8.56□□□□□ -1.04
COPB1-210ENST00000533533 HMGCLP35914 325 aa8.56□□□□□ -1.04
COPB1-210ENST00000533533 COILP38432 576 aaPredicted RBP8.56□□□□□ -1.04
COPB1-210ENST00000533533 PAFAH1B1P43034 410 aa8.56□□□□□ -1.04
COPB1-210ENST00000533533 PDE1BQ01064 536 aa8.56□□□□□ -1.04
COPB1-210ENST00000533533 HHEXQ03014 270 aa8.56□□□□□ -1.04
COPB1-210ENST00000533533 GPS1Q13098 491 aa8.56□□□□□ -1.04
COPB1-210ENST00000533533 NFATC2Q13469 925 aa8.56□□□□□ -1.04
COPB1-210ENST00000533533 PPP1R7Q15435 360 aa8.56□□□□□ -1.04
COPB1-210ENST00000533533 TAF1AQ15573 450 aaPredicted RBP8.56□□□□□ -1.04
COPB1-210ENST00000533533 CHRNA6Q15825 494 aa8.56□□□□□ -1.04
COPB1-210ENST00000533533 DEFB109BQ30KR1 87 aa8.56□□□□□ -1.04
COPB1-210ENST00000533533 CRTC2Q53ET0 693 aaPredicted RBP8.56□□□□□ -1.04
COPB1-210ENST00000533533 LACTB2Q53H82 288 aaPredicted RBP8.56□□□□□ -1.04
COPB1-210ENST00000533533 ZDHHC20Q5W0Z9 365 aa8.56□□□□□ -1.04
COPB1-210ENST00000533533 TTC27Q6P3X3 843 aa8.56□□□□□ -1.04
COPB1-210ENST00000533533 PHYKPLQ8IUZ5 450 aa8.56□□□□□ -1.04
COPB1-210ENST00000533533 RAVER1Q8IY67 606 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms