RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 GPN2Q9H9Y4 310 aaPredicted RBP15.13■□□□□ 0.01
CPSF1-211ENST00000533492 FAM8A1Q9UBU6 413 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 EPHA6Q9UF33 1036 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 ACSL5Q9ULC5 683 aa15.13■□□□□ 0.01
CPSF1-211ENST00000533492 ZNF891A8MT65 544 aaPredicted RBP15.12■□□□□ 0.01
CPSF1-211ENST00000533492 GOLGA6L6A8MZA4 724 aa15.12■□□□□ 0.01
CPSF1-211ENST00000533492 CFAP99D6REC4 459 aa15.12■□□□□ 0.01
CPSF1-211ENST00000533492 SFTPCP11686 197 aa15.12■□□□□ 0.01
CPSF1-211ENST00000533492 PLA2G2AP14555 144 aa15.12■□□□□ 0.01
CPSF1-211ENST00000533492 XIAPP98170 497 aa15.12■□□□□ 0.01
CPSF1-211ENST00000533492 TMEM139Q8IV31 216 aa15.12■□□□□ 0.01
CPSF1-211ENST00000533492 OR2L2Q8NH16 312 aa15.12■□□□□ 0.01
CPSF1-211ENST00000533492 HEXDCQ8WVB3 486 aa15.12■□□□□ 0.01
CPSF1-211ENST00000533492 OR6C1Q96RD1 312 aa15.12■□□□□ 0.01
CPSF1-211ENST00000533492 SLC12A9Q9BXP2 914 aa15.12■□□□□ 0.01
CPSF1-211ENST00000533492 SPRY4Q9C004 299 aa15.12■□□□□ 0.01
CPSF1-211ENST00000533492 ZNF768Q9H5H4 540 aaKnown RBP15.12■□□□□ 0.01
CPSF1-211ENST00000533492 FAM96AQ9H5X1 160 aa15.12■□□□□ 0.01
CPSF1-211ENST00000533492 ARNT2Q9HBZ2 717 aa15.12■□□□□ 0.01
CPSF1-211ENST00000533492 IMP3Q9NV31 184 aaKnown RBP15.12■□□□□ 0.01
CPSF1-211ENST00000533492 SIDT1Q9NXL6 827 aaKnown RBP15.12■□□□□ 0.01
CPSF1-211ENST00000533492 TMEM184BQ9Y519 407 aaPredicted RBP15.12■□□□□ 0.01
CPSF1-211ENST00000533492 CFAP20Q9Y6A4 193 aaKnown RBP15.12■□□□□ 0.01
CPSF1-211ENST00000533492 GCN1Q92616 2671 aaKnown RBP15.11■□□□□ 0.01
CPSF1-211ENST00000533492 DDX3YO15523 660 aaKnown RBP15.11■□□□□ 0.01
CPSF1-211ENST00000533492 PSMD3O43242 534 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 KIF1CO43896 1103 aaKnown RBP15.11■□□□□ 0.01
CPSF1-211ENST00000533492 POLBP06746 335 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 SLC35G4P0C7Q5 338 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 FAM87AP0C7U9 286 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 MTHFD1P11586 935 aaKnown RBP15.11■□□□□ 0.01
CPSF1-211ENST00000533492 CDC25BP30305 580 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 SH3BP2P78314 561 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 ABHD18Q0P651 414 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 MSLNQ13421 630 aaPredicted RBP15.11■□□□□ 0.01
CPSF1-211ENST00000533492 KRT33BQ14525 404 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 IL11RAQ14626 422 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 GSE1Q14687 1217 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 P3H1Q32P28 736 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 BCL7AQ4VC05 210 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 DENND5AQ6IQ26 1287 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 CYB5D1Q6P9G0 228 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 TIPARPQ7Z3E1 657 aaKnown RBP15.11■□□□□ 0.01
CPSF1-211ENST00000533492 PRSS42Q7Z5A4 293 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 SNX20Q7Z614 316 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 RASGRP3Q8IV61 690 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 CFAP206Q8IYR0 622 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 GPR150Q8NGU9 434 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 NAT14Q8WUY8 206 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 ELMO2Q96JJ3 720 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 C12orf66Q96MD2 445 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 ALS2CR12Q96Q35 445 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 INSM2Q96T92 566 aaPredicted RBP15.11■□□□□ 0.01
CPSF1-211ENST00000533492 COPS8Q99627 209 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 C19orf43Q9BQ61 176 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 ULBP3Q9BZM4 244 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 RAB33BQ9H082 229 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 WWP1Q9H0M0 922 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 LRRC40Q9H9A6 602 aa15.11■□□□□ 0.01
CPSF1-211ENST00000533492 A0A0U1RQJ8 604 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 LOC101059948A0A1B0GTJ6 334 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 LDB2O43679 373 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 METTL18O95568 372 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 ATP1B2P14415 290 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-211ENST00000533492 TPH1P17752 444 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 MC4RP32245 332 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 ARL4DP49703 201 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 ZNF140P52738 457 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-211ENST00000533492 NFATC3Q12968 1075 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 KLF1Q13351 362 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-211ENST00000533492 GPR33Q49SQ1 333 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 ZRANB3Q5FWF4 1079 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 ARMC6Q6NXE6 501 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 TAS2R42Q7RTR8 314 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 UNC5BQ8IZJ1 945 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 NXPE1Q8N323 547 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 RNF10Q8N5U6 811 aaKnown RBP15.1■□□□□ 0.01
CPSF1-211ENST00000533492 ESX1Q8N693 406 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 ZFPM2Q8WW38 1151 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 KLHL6Q8WZ60 621 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 UBXN4Q92575 508 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 HES6Q96HZ4 224 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 SLC45A3Q96JT2 553 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 LINC00615Q96LM1 132 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-211ENST00000533492 TMEM121Q9BTD3 319 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 FAM117AQ9C073 453 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 R3HDM2Q9Y2K5 976 aaKnown RBP15.1■□□□□ 0.01
CPSF1-211ENST00000533492 HEMK1Q9Y5R4 338 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-211ENST00000533492 COLEC10Q9Y6Z7 277 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 CFAP46Q8IYW2 2715 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 ZNF462Q96JM2 2506 aa15.1■□□□□ 0.01
CPSF1-211ENST00000533492 AGAP14A8MT82 685 aa15.09■□□□□ 0.01
CPSF1-211ENST00000533492 J3QKU1 62 aa15.09■□□□□ 0.01
CPSF1-211ENST00000533492 CCL22O00626 93 aa15.09■□□□□ 0.01
CPSF1-211ENST00000533492 DLGAP3O95886 979 aa15.09■□□□□ 0.01
CPSF1-211ENST00000533492 NELFEP18615 380 aaKnown RBP15.09■□□□□ 0.01
CPSF1-211ENST00000533492 SEPT6Q14141 434 aa15.09■□□□□ 0.01
CPSF1-211ENST00000533492 MAP7Q14244 749 aa15.09■□□□□ 0.01
CPSF1-211ENST00000533492 SEL1L2Q5TEA6 688 aa15.09■□□□□ 0.01
CPSF1-211ENST00000533492 KCTD11Q693B1 232 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms