RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 HGSNATQ68CP4 663 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 SLC27A1Q6PCB7 646 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 RNF44Q7L0R7 432 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 VASH1Q7L8A9 365 aaPredicted RBP6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 DNAJA4Q8WW22 397 aaPredicted RBP6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 BRD9Q9H8M2 597 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 PIH1D1Q9NWS0 290 aaKnown RBP6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 SMPD3Q9NY59 655 aaPredicted RBP6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 PPP4R1LQ9P1A2 415 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 ERGIC3Q9Y282 383 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 DHRS7Q9Y394 339 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 HCN4Q9Y3Q4 1203 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 CD3EAPO15446 510 aaKnown RBP6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 TCEA3O75764 348 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 CSF2P04141 144 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 CHRNGP07510 517 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 GSTM5P46439 218 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 RNF4P78317 190 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 SLC13A2Q13183 592 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 RBM48Q5RL73 367 aaKnown RBP6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 C16orf46Q6P387 395 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 CCBE1Q6UXH8 406 aaPredicted RBP6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 HDDC3Q8N4P3 179 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 REPS2Q8NFH8 660 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 GPR156Q8NFN8 814 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 OR4Q3Q8NH05 313 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 TNFAIP8L1Q8WVP5 186 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 TNFRSF25Q93038 417 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 ABHD16BQ9H3Z7 469 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 C8orf33Q9H7E9 229 aaPredicted RBP6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 TRPM3Q9HCF6 1732 aaPredicted RBP6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 IFT46Q9NQC8 304 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 IL17RBQ9NRM6 502 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 TSPAN16Q9UKR8 245 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 PLAGL2Q9UPG8 496 aa6.9□□□□□ -1.31
TGFBR3-210ENST00000533089 TRAV19A0A0A6YYK7 116 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 TRDMT1O14717 391 aaKnown RBP6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 AKAP8O43823 692 aaKnown RBP6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 USP17L7P0C7H9 530 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 MYL9P24844 172 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 SLC3A1Q07837 685 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 CRY1Q16526 586 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 ZNF181Q2M3W8 571 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 RFX4Q33E94 735 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 ZNF558Q96NG5 402 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 NAT9Q9BTE0 207 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 GRIP1Q9Y3R0 1128 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 ATP6AP2A0A1C7CYW4 349 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 FAM220BPB1ANY3 271 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 CHP2O43745 196 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 MICAL2O94851 1124 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 RBP1P09455 135 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 ZNF7P17097 686 aaPredicted RBP6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 HNF1AP20823 631 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 PKLRP30613 574 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 PCP4P48539 62 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 MECP2P51608 486 aaKnown RBP6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 ZNF132P52740 706 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 POU6F2P78424 691 aaPredicted RBP6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 INTS6LQ5JSJ4 861 aaKnown RBP6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 PRAMEF19Q5SWL8 479 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 AKR1C8PQ5T2L2 129 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 SPOCD1Q6ZMY3 1216 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 FAM124AQ86V42 546 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 OR6C4Q8NGE1 309 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 PCDH19Q8TAB3 1148 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 NANPQ8TBE9 248 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 CD300LFQ8TDQ1 290 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 COL26A1Q96A83 441 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 HAVCR1Q96D42 359 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 SERPINB11Q96P15 392 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 DHRS9Q9BPW9 319 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 FRMD8P1Q9BZ68 369 aaPredicted RBP6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 QRSL1Q9H0R6 528 aaKnown RBP6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 REV1Q9UBZ9 1251 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 ZNHIT2Q9UHR6 403 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 PDE10AQ9Y233 779 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 MRPS23Q9Y3D9 190 aaKnown RBP6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 ACTL7BQ9Y614 415 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 U3KQV3 271 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 RGPD8O14715 1765 aaPredicted RBP6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 AQP9O43315 295 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 CABYRO75952 493 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 FARS2O95363 451 aaKnown RBP6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 TGM6O95932 706 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 RAB5CP51148 216 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 SKP1P63208 163 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 HKDC1Q2TB90 917 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 RALGPS1Q5JS13 557 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 CDYL2Q8N8U2 506 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 PIWIL2Q8TC59 973 aaKnown RBP6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 SPPL2AQ8TCT8 520 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 SPOCK2Q92563 424 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 RTKNQ9BST9 563 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 CRB3Q9BUF7 120 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 AGXT2Q9BYV1 514 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 DPY30Q9C005 99 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 CYP3A43Q9HB55 503 aa6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 SAE1Q9UBE0 346 aaPredicted RBP6.89□□□□□ -1.31
TGFBR3-210ENST00000533089 ZNF230Q9UIE0 474 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms