RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 PAK5Q9P286 719 aa16.34■□□□□ 0.21
PKP3-209ENST00000533069 PCYOX1Q9UHG3 505 aa16.34■□□□□ 0.21
PKP3-209ENST00000533069 DRG1Q9Y295 367 aaKnown RBP16.34■□□□□ 0.21
PKP3-209ENST00000533069 SSUH2Q9Y2M2 353 aa16.34■□□□□ 0.21
PKP3-209ENST00000533069 ADAMTS20P59510 1910 aa16.33■□□□□ 0.21
PKP3-209ENST00000533069 PRAMEF33A0A0G2JMD5 474 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 MGAT4DA6NG13 374 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 OR52A4PA6NMU1 304 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 PRAMEF10O60809 474 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 SUN1O94901 812 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 LIPCP11150 499 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 TPH1P17752 444 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 MPSTP25325 297 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 ETV5P41161 510 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 LMAN1P49257 510 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 CLN3Q13286 438 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 SEMA5AQ13591 1074 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 SNX1Q13596 522 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 SEPT6Q14141 434 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 C4orf22Q6V702 233 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 DET1Q7L5Y6 550 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 GPR155Q7Z3F1 870 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 TAB3Q8N5C8 712 aaPredicted RBP16.33■□□□□ 0.2
PKP3-209ENST00000533069 BEND7Q8N7W2 519 aaPredicted RBP16.33■□□□□ 0.2
PKP3-209ENST00000533069 PRELID2Q8N945 189 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 DNAAF3Q8N9W5 541 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 OR2L2Q8NH16 312 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 STYXQ8WUJ0 223 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 USP7Q93009 1102 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 SGF29Q96ES7 293 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 LINC00615Q96LM1 132 aaPredicted RBP16.33■□□□□ 0.2
PKP3-209ENST00000533069 DDA1Q9BW61 102 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 TBC1D10AQ9BXI6 508 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 AP1M1Q9BXS5 423 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 ETNK1Q9HBU6 452 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 SLC40A1Q9NP59 571 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 PCDHGA3Q9Y5H0 932 aa16.33■□□□□ 0.2
PKP3-209ENST00000533069 MN1Q10571 1320 aaPredicted RBP16.33■□□□□ 0.2
PKP3-209ENST00000533069 TRBV5-4A0A0C4DH59 114 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 MROH6A6NGR9 719 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 B4E171 279 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 C9orf172C9J069 976 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 AGRPO00253 132 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 NDC80O14777 642 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 UBXN7O94888 489 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 TUBBP07437 444 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 ANKRD34CP0C6C1 535 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 FGF3P11487 239 aaPredicted RBP16.32■□□□□ 0.2
PKP3-209ENST00000533069 CCL4P13236 92 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 PSMA3P25788 255 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 TSPAN7P41732 249 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 PRLHRP49683 370 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 RAB15P59190 212 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 CXADRP78310 365 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 NFE2L1Q14494 772 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 SKIDA1Q1XH10 827 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 METRNLQ641Q3 311 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 CCDC137Q6PK04 289 aaKnown RBP16.32■□□□□ 0.2
PKP3-209ENST00000533069 PPP1R21Q6ZMI0 780 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 FAM83HQ6ZRV2 1179 aaPredicted RBP16.32■□□□□ 0.2
PKP3-209ENST00000533069 ARHGAP22Q7Z5H3 698 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 OR52K1Q8NGK4 314 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 ARHGEF17Q96PE2 2063 aaPredicted RBP16.32■□□□□ 0.2
PKP3-209ENST00000533069 TAAR9Q96RI9 348 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 ASPSCR1Q9BZE9 553 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 RAB6BQ9NRW1 208 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 ZDHHC3Q9NYG2 299 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 ACSL5Q9ULC5 683 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 WDR37Q9Y2I8 494 aa16.32■□□□□ 0.2
PKP3-209ENST00000533069 IGLV3-16A0A075B6K0 115 aa16.31■□□□□ 0.2
PKP3-209ENST00000533069 TEX51A0A1B0GUA7 166 aa16.31■□□□□ 0.2
PKP3-209ENST00000533069 HEATR9A2RTY3 570 aa16.31■□□□□ 0.2
PKP3-209ENST00000533069 FAM187AA6NFU0 413 aa16.31■□□□□ 0.2
PKP3-209ENST00000533069 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.31■□□□□ 0.2
PKP3-209ENST00000533069 CCL22O00626 93 aa16.31■□□□□ 0.2
PKP3-209ENST00000533069 TOX3O15405 576 aaPredicted RBP16.31■□□□□ 0.2
PKP3-209ENST00000533069 ATP1B2P14415 290 aaPredicted RBP16.31■□□□□ 0.2
PKP3-209ENST00000533069 ACRV1P26436 265 aa16.31■□□□□ 0.2
PKP3-209ENST00000533069 PBLDP30039 288 aaPredicted RBP16.31■□□□□ 0.2
PKP3-209ENST00000533069 COILP38432 576 aaPredicted RBP16.31■□□□□ 0.2
PKP3-209ENST00000533069 CAPZBP47756 277 aa16.31■□□□□ 0.2
PKP3-209ENST00000533069 CACNG1Q06432 222 aa16.31■□□□□ 0.2
PKP3-209ENST00000533069 GPR18Q14330 331 aa16.31■□□□□ 0.2
PKP3-209ENST00000533069 CLCA4Q14CN2 919 aa16.31■□□□□ 0.2
PKP3-209ENST00000533069 RPE65Q16518 533 aa16.31■□□□□ 0.2
PKP3-209ENST00000533069 ZRANB3Q5FWF4 1079 aa16.31■□□□□ 0.2
PKP3-209ENST00000533069 SNAP47Q5SQN1 464 aa16.31■□□□□ 0.2
PKP3-209ENST00000533069 C8orf74Q6P047 294 aa16.31■□□□□ 0.2
PKP3-209ENST00000533069 HM13Q8TCT9 377 aa16.31■□□□□ 0.2
PKP3-209ENST00000533069 SNRNP27Q8WVK2 155 aaKnown RBP16.31■□□□□ 0.2
PKP3-209ENST00000533069 CDKN2AIPNLQ96HQ2 116 aa16.31■□□□□ 0.2
PKP3-209ENST00000533069 RANBP9Q96S59 729 aa16.31■□□□□ 0.2
PKP3-209ENST00000533069 UBL7Q96S82 380 aaPredicted RBP16.31■□□□□ 0.2
PKP3-209ENST00000533069 FAM96AQ9H5X1 160 aa16.31■□□□□ 0.2
PKP3-209ENST00000533069 VPS37BQ9H9H4 285 aa16.31■□□□□ 0.2
PKP3-209ENST00000533069 PIH1D1Q9NWS0 290 aaKnown RBP16.31■□□□□ 0.2
PKP3-209ENST00000533069 OGFRQ9NZT2 677 aa16.31■□□□□ 0.2
PKP3-209ENST00000533069 FOXJ2Q9P0K8 574 aa16.31■□□□□ 0.2
PKP3-209ENST00000533069 PCDHB11Q9Y5F2 797 aa16.31■□□□□ 0.2
PKP3-209ENST00000533069 ZNF106Q9H2Y7 1883 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms