RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 POLE3Q9NRF9 147 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 FGF18O76093 207 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 AVPR1BP47901 424 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 KCNQ1P51787 676 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 KLHL17Q6TDP4 642 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 ZCCHC10Q8TBK6 192 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 LRMDAQ9H2I8 198 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 NOL11Q9H8H0 719 aaKnown RBP14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 SLC17A6Q9P2U8 582 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 NUP188Q5SRE5 1749 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 INPPL1O15357 1258 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 PI15O43692 258 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 ONECUT3O60422 494 aaPredicted RBP14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 TMCC2O75069 709 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 PFKMP08237 780 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 HSD17B2P37059 387 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 PPIDQ08752 370 aaKnown RBP14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 HIPK1Q86Z02 1210 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 MMAAQ8IVH4 418 aaKnown RBP14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 OR7A2PQ8NGA2 310 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 NEK7Q8TDX7 302 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 SLC22A18Q96BI1 424 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 PAIP1Q9H074 479 aaKnown RBP14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 TLL2Q9Y6L7 1015 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 A0A0J9YYE9 177 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 SLC7A4O43246 635 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 KERAO60938 352 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 HOXC12P31275 282 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 SLC7A2P52569 658 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 NRLP54845 237 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 PRR5P85299 388 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 LCP2Q13094 533 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 PRR23BQ6ZRT6 265 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 SLC9A6Q92581 669 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 TEPSINQ96N21 525 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 GMLQ99445 158 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 TLR9Q9NR96 1032 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 UBE2QL1A1L167 161 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 OR51F1A6NGY5 319 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 UNGP13051 313 aaPredicted RBP14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 NDUFS1P28331 727 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 RFC2P35250 354 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 HEPACAMQ14CZ8 416 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 TMEM164Q5U3C3 297 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 ESAMQ96AP7 390 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 HBEGFQ99075 208 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 CCDC28BQ9BUN5 200 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 RNPEPL1Q9HAU8 725 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 WNT6Q9Y6F9 365 aa14.61□□□□□ -0.07
PCDHA9-202ENST00000532602 TSC22D2O75157 780 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 TAF1AQ15573 450 aaPredicted RBP14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 NDUFA5Q16718 116 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 PLEKHG4Q58EX7 1191 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 JAZF1Q86VZ6 243 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 TBC1D21Q8IYX1 336 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 SLC47A1Q96FL8 570 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 MYADML2A6NDP7 307 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 LYNP07948 512 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 OMPP47874 163 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 DGKEP52429 567 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 LIMK2P53671 638 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 RPP38P78345 283 aaKnown RBP14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 TMCO2Q7Z6W1 182 aaPredicted RBP14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 KCTD13Q8WZ19 329 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 AP3S1Q92572 193 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 DNAJB4Q9UDY4 337 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 RPL26L1Q9UNX3 145 aaKnown RBP14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 PCDHGA11Q9Y5H2 935 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 ASNA1O43681 348 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 OR1F1O43749 312 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 ADH5P11766 374 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 CARD16Q5EG05 197 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 ARMCX6Q7L4S7 300 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 SNX20Q7Z614 316 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 ATCAYQ86WG3 371 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 HAPLN3Q96S86 360 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 EBPLQ9BY08 206 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 C5P01031 1676 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 GCNT6Q5T4J0 391 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 BTN2A1Q7KYR7 527 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 DTLQ9NZJ0 730 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 EHD3Q9NZN3 535 aa14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 ATXN2Q99700 1313 aaKnown RBP14.6□□□□□ -0.07
PCDHA9-202ENST00000532602 C9JVG2 144 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 LCA5LO95447 670 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 RGS8P57771 180 aaPredicted RBP14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 CHIT1Q13231 466 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 ZNF599Q96NL3 588 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 OR2AG1Q9H205 316 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 MUC13Q9H3R2 512 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 PLLPQ9Y342 182 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 AQP1P29972 269 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 ITGADQ13349 1161 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 ZBTB6Q15916 424 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 VANGL1Q8TAA9 524 aaPredicted RBP14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 TMEM209Q96SK2 561 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 TRMT61BQ9BVS5 477 aaKnown RBP14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 C8orf4Q9NR00 106 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 PIGVQ9NUD9 493 aa14.59□□□□□ -0.07
PCDHA9-202ENST00000532602 MRPS7Q9Y2R9 242 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms