RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 ROPN1Q9HAT0 212 aaPredicted RBP9.28□□□□□ -0.92
VPS26B-207ENST00000532160 TMBIM4Q9HC24 238 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.28□□□□□ -0.92
VPS26B-207ENST00000532160 FOXJ2Q9P0K8 574 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 APPL1Q9UKG1 709 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 ACSL6Q9UKU0 697 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 RRP15Q9Y3B9 282 aaKnown RBP9.28□□□□□ -0.92
VPS26B-207ENST00000532160 RNF215Q9Y6U7 377 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 NBASA2RRP1 2371 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 UBR5O95071 2799 aaPredicted RBP9.28□□□□□ -0.92
VPS26B-207ENST00000532160 RELNP78509 3460 aa9.28□□□□□ -0.92
VPS26B-207ENST00000532160 PRAMEF33A0A0G2JMD5 474 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 TMX2-CTNND1H3BSU7 103 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 CACNB4O00305 520 aaPredicted RBP9.27□□□□□ -0.93
VPS26B-207ENST00000532160 NVLO15381 856 aaKnown RBP9.27□□□□□ -0.93
VPS26B-207ENST00000532160 STX7O15400 261 aaKnown RBP9.27□□□□□ -0.93
VPS26B-207ENST00000532160 GPR39O43194 453 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 LDB2O43679 373 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 PRAMEF10O60809 474 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 PPFIA2O75334 1257 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 KIAA0754O94854 1291 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 NUDT17P0C025 328 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 LIPCP11150 499 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 GLB1P16278 677 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 ZNF30P17039 623 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 BPIP17213 487 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 WT1P19544 449 aaPredicted RBP9.27□□□□□ -0.93
VPS26B-207ENST00000532160 SPINT3P49223 89 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 MAZP56270 477 aaKnown RBP9.27□□□□□ -0.93
VPS26B-207ENST00000532160 CORO7P57737 925 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 GNGT1P63211 74 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 SARNPP82979 210 aaKnown RBP9.27□□□□□ -0.93
VPS26B-207ENST00000532160 CDK16Q00536 496 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 NFKB2Q00653 900 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 DHX9Q08211 1270 aaKnown RBP9.27□□□□□ -0.93
VPS26B-207ENST00000532160 NFATC3Q12968 1075 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 CALCOCO2Q13137 446 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 MORF4L2Q15014 288 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 TAF1AQ15573 450 aaPredicted RBP9.27□□□□□ -0.93
VPS26B-207ENST00000532160 BBS9Q3SYG4 887 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 CASC4Q6P4E1 433 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 OGFOD3Q6PK18 319 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 SPRED1Q7Z699 444 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 TECPR1Q7Z6L1 1165 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 ZFAND4Q86XD8 727 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 SLITRK4Q8IW52 837 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 CBARPQ8N350 705 aaPredicted RBP9.27□□□□□ -0.93
VPS26B-207ENST00000532160 GPR26Q8NDV2 337 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 MCUQ8NE86 351 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 OR6C4Q8NGE1 309 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 OR56A4Q8NGH8 313 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 FBXO25Q8TCJ0 367 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 BRSK1Q8TDC3 778 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 BCAS4Q8TDM0 211 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 NUS1Q96E22 293 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 SGF29Q96ES7 293 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 PGM2Q96G03 612 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 DNAJC1Q96KC8 554 aaKnown RBP9.27□□□□□ -0.93
VPS26B-207ENST00000532160 AGAP2Q99490 1192 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 FMO2Q99518 471 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 TRIM4Q9C037 500 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 ABCG8Q9H221 673 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 SEMA6CQ9H3T2 930 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 CLMPQ9H6B4 373 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 CHRAC1Q9NRG0 131 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 PKD2L2Q9NZM6 624 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 BFARQ9NZS9 450 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 IL17CQ9P0M4 197 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 WHRNQ9P202 907 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 SLC2A6Q9UGQ3 507 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 FKBPLQ9UIM3 349 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 PLAAQ9Y263 795 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 DOPEY2Q9Y3R5 2298 aa9.27□□□□□ -0.93
VPS26B-207ENST00000532160 FLNCQ14315 2725 aa9.26□□□□□ -0.93
VPS26B-207ENST00000532160 ZFC3H1O60293 1989 aaKnown RBP9.26□□□□□ -0.93
VPS26B-207ENST00000532160 OR51F1A6NGY5 319 aa9.26□□□□□ -0.93
VPS26B-207ENST00000532160 C9orf172C9J069 976 aa9.26□□□□□ -0.93
VPS26B-207ENST00000532160 MYO1CO00159 1063 aa9.26□□□□□ -0.93
VPS26B-207ENST00000532160 CRTAMO95727 393 aa9.26□□□□□ -0.93
VPS26B-207ENST00000532160 FAM87AP0C7U9 286 aa9.26□□□□□ -0.93
VPS26B-207ENST00000532160 PRSS56P0CW18 603 aa9.26□□□□□ -0.93
VPS26B-207ENST00000532160 PNLIPP16233 465 aa9.26□□□□□ -0.93
VPS26B-207ENST00000532160 LPOP22079 712 aaPredicted RBP9.26□□□□□ -0.93
VPS26B-207ENST00000532160 ADRA1DP25100 572 aa9.26□□□□□ -0.93
VPS26B-207ENST00000532160 NMBRP28336 390 aa9.26□□□□□ -0.93
VPS26B-207ENST00000532160 CA5AP35218 305 aa9.26□□□□□ -0.93
VPS26B-207ENST00000532160 HMGCLP35914 325 aa9.26□□□□□ -0.93
VPS26B-207ENST00000532160 TRIM23P36406 574 aa9.26□□□□□ -0.93
VPS26B-207ENST00000532160 MDH1P40925 334 aaKnown RBP9.26□□□□□ -0.93
VPS26B-207ENST00000532160 NPY2RP49146 381 aa9.26□□□□□ -0.93
VPS26B-207ENST00000532160 ARSDP51689 593 aa9.26□□□□□ -0.93
VPS26B-207ENST00000532160 ZNF140P52738 457 aaPredicted RBP9.26□□□□□ -0.93
VPS26B-207ENST00000532160 MAPK10P53779 464 aa9.26□□□□□ -0.93
VPS26B-207ENST00000532160 GYS2P54840 703 aa9.26□□□□□ -0.93
VPS26B-207ENST00000532160 KCNC4Q03721 635 aa9.26□□□□□ -0.93
VPS26B-207ENST00000532160 IFFO1Q0D2I5 559 aa9.26□□□□□ -0.93
VPS26B-207ENST00000532160 C16orf72Q14CZ0 275 aa9.26□□□□□ -0.93
VPS26B-207ENST00000532160 FASTKD3Q14CZ7 662 aaKnown RBP9.26□□□□□ -0.93
VPS26B-207ENST00000532160 C14orf28Q4W4Y0 310 aa9.26□□□□□ -0.93
VPS26B-207ENST00000532160 CEP85LQ5SZL2 805 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms