RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 FTCDO95954 541 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 MT-CYBP00156 380 aaPredicted RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 HPXP02790 462 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 CSF2P04141 144 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 ITGA2BP08514 1039 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 ZGLP1P0C6A0 271 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 IMPDH2P12268 514 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 CTNNA1P35221 906 aaKnown RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 UGT1A5P35504 534 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 HSPA9P38646 679 aaKnown RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 CD86P42081 329 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 HNRNPKP61978 463 aaKnown RBP eCLIP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 IFI35P80217 286 aaPredicted RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 TEKQ02763 1124 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 ELP6Q0PNE2 266 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 WASHC5Q12768 1159 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 KIF5AQ12840 1032 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 EIF2B5Q13144 721 aaKnown RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 PDE1CQ14123 709 aaPredicted RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 PDK1Q15118 436 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 IRF4Q15306 451 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 NR0B2Q15466 257 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 TEX44Q53QW1 395 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 ODF2Q5BJF6 829 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 ARMC12Q5T9G4 340 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 ZCCHC8Q6NZY4 707 aaKnown RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 ERAP2Q6P179 960 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 Q6ZVL8 140 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 DPPA4Q7L190 304 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 RAB11FIP2Q7L804 512 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 HSD11B1LQ7Z5J1 315 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 CCDC50Q8IVM0 306 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 BBS5Q8N3I7 341 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 FBXO39Q8N4B4 442 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 PAF1Q8N7H5 531 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 SCRN2Q96FV2 425 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 COQ10AQ96MF6 247 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 FERD3LQ96RJ6 166 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 RBM15Q96T37 977 aaKnown RBP eCLIP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 CCDC3Q9BQI4 270 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 LGR4Q9BXB1 951 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 POLR1EQ9GZS1 481 aaKnown RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 USP29Q9HBJ7 922 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 LUC7LQ9NQ29 371 aaKnown RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 FOXJ2Q9P0K8 574 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 SEPT10Q9P0V9 454 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 PISDQ9UG56 409 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 PPT2Q9UMR5 302 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 PHTF1Q9UMS5 762 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 GUCA1BQ9UMX6 200 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 PPIL1Q9Y3C6 166 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 OR1A2Q9Y585 309 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 KIF26BQ2KJY2 2108 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 LRP4O75096 1905 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 RP1L1Q8IWN7 2480 aaPredicted RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 A0A0J9YYE9 177 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 TCRBV7S2A1N4TA0A589 114 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 BLACEA4D250 179 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 A6NNZ2 444 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 F5H423 210 aaPredicted RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 AQP9O43315 295 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 ZNF500O60304 480 aaPredicted RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 SOCS5O75159 536 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 HEXIM1O94992 359 aaKnown RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 CLDN7O95471 211 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 CPP00450 1065 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 TRBC1P01850 177 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 FUCA1P04066 466 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 PCCBP05166 539 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 ELFN1P0C7U0 828 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 ZFXP17010 805 aaPredicted RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 ITIH1P19827 911 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 PTPN3P26045 913 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 CTNNA2P26232 953 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 ETV5P41161 510 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 RABIFP47224 123 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 NR2C2P49116 596 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 SUOXP51687 545 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 RWDD2BP57060 319 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 CCZ1BP86790 482 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 CCZ1P86791 482 aaPredicted RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 TFDP2Q14188 446 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 ACOX1Q15067 660 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 PRKD1Q15139 912 aaPredicted RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 CNGA3Q16281 694 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 ZNF648Q5T619 568 aaPredicted RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 LCE3BQ5TA77 95 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 KYAT3Q6YP21 454 aaKnown RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 BBS12Q6ZW61 710 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 ABHD4Q8TB40 342 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 P3H4Q92791 437 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 SCAMP4Q969E2 229 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 TSACCQ96A04 125 aaPredicted RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 GRAMD1AQ96CP6 724 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 EID2BQ96D98 161 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 IMP4Q96G21 291 aaKnown RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 TEKT5Q96M29 485 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 ZNF830Q96NB3 372 aaPredicted RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 MCCC1Q96RQ3 725 aaPredicted RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 APOOQ9BUR5 198 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms