RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 GALNT6Q8NCL4 622 aa20.46■□□□□ 0.87
SMPD1-204ENST00000530395 LRRC45Q96CN5 670 aa20.46■□□□□ 0.87
SMPD1-204ENST00000530395 ELMO2Q96JJ3 720 aa20.46■□□□□ 0.87
SMPD1-204ENST00000530395 PPP1R2P1Q96PQ5 205 aa20.46■□□□□ 0.87
SMPD1-204ENST00000530395 OSBPL8Q9BZF1 889 aa20.46■□□□□ 0.87
SMPD1-204ENST00000530395 ASB8Q9H765 288 aa20.46■□□□□ 0.87
SMPD1-204ENST00000530395 C10orf88Q9H8K7 445 aa20.46■□□□□ 0.87
SMPD1-204ENST00000530395 PDE7BQ9NP56 450 aa20.46■□□□□ 0.87
SMPD1-204ENST00000530395 IMP3Q9NV31 184 aaKnown RBP20.46■□□□□ 0.87
SMPD1-204ENST00000530395 LNPEPQ9UIQ6 1025 aa20.46■□□□□ 0.87
SMPD1-204ENST00000530395 PCDHB3Q9Y5E6 796 aa20.46■□□□□ 0.87
SMPD1-204ENST00000530395 PCDHA3Q9Y5H8 950 aa20.46■□□□□ 0.87
SMPD1-204ENST00000530395 CCDC66A2RUB6 948 aa20.45■□□□□ 0.86
SMPD1-204ENST00000530395 C5orf60A6NFR6 353 aa20.45■□□□□ 0.86
SMPD1-204ENST00000530395 PJA2O43164 708 aa20.45■□□□□ 0.86
SMPD1-204ENST00000530395 ZNF189O75820 626 aaPredicted RBP20.45■□□□□ 0.86
SMPD1-204ENST00000530395 KIAA0754O94854 1291 aa20.45■□□□□ 0.86
SMPD1-204ENST00000530395 CCNYL3P0C7X3 344 aa20.45■□□□□ 0.86
SMPD1-204ENST00000530395 MTHFD1P11586 935 aaKnown RBP20.45■□□□□ 0.86
SMPD1-204ENST00000530395 OAS2P29728 719 aaKnown RBP20.45■□□□□ 0.86
SMPD1-204ENST00000530395 PTPN7P35236 360 aa20.45■□□□□ 0.86
SMPD1-204ENST00000530395 EIF3EP60228 445 aaKnown RBP20.45■□□□□ 0.86
SMPD1-204ENST00000530395 PTPRCAPQ14761 206 aa20.45■□□□□ 0.86
SMPD1-204ENST00000530395 DEFB109BQ30KR1 87 aa20.45■□□□□ 0.86
SMPD1-204ENST00000530395 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.45■□□□□ 0.86
SMPD1-204ENST00000530395 METRNLQ641Q3 311 aa20.45■□□□□ 0.86
SMPD1-204ENST00000530395 C16orf46Q6P387 395 aa20.45■□□□□ 0.86
SMPD1-204ENST00000530395 DET1Q7L5Y6 550 aa20.45■□□□□ 0.86
SMPD1-204ENST00000530395 SIDT2Q8NBJ9 832 aaKnown RBP20.45■□□□□ 0.86
SMPD1-204ENST00000530395 OR4K2Q8NGD2 314 aa20.45■□□□□ 0.86
SMPD1-204ENST00000530395 APOBEC4Q8WW27 367 aaKnown RBP20.45■□□□□ 0.86
SMPD1-204ENST00000530395 PANX2Q96RD6 677 aa20.45■□□□□ 0.86
SMPD1-204ENST00000530395 ACSL5Q9ULC5 683 aa20.45■□□□□ 0.86
SMPD1-204ENST00000530395 EPN1Q9Y6I3 576 aaPredicted RBP20.45■□□□□ 0.86
SMPD1-204ENST00000530395 MGAT4DA6NG13 374 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 KCNN4O15554 427 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 SRP72O76094 671 aaKnown RBP20.44■□□□□ 0.86
SMPD1-204ENST00000530395 CRTAMO95727 393 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 MT-ND3P03897 115 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 RBP3P10745 1247 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 PYGMP11217 842 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 RALBP11234 206 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 PSMB4P28070 264 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 CA5AP35218 305 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 ARL4DP49703 201 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 RWDD2BP57060 319 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 SEPT6Q14141 434 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 ANKRD20A2Q5SQ80 823 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 ANKRD20A1Q5TYW2 823 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 ANKRD20A3Q5VUR7 823 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 DARS2Q6PI48 645 aaKnown RBP20.44■□□□□ 0.86
SMPD1-204ENST00000530395 RANBP10Q6VN20 620 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 TMTC1Q8IUR5 882 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 C9orf43Q8TAL5 461 aaPredicted RBP20.44■□□□□ 0.86
SMPD1-204ENST00000530395 ULK4Q96C45 1275 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 DCUN1D1Q96GG9 259 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 CD180Q99467 661 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 APOL2Q9BQE5 337 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 GORASP1Q9BQQ3 440 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 FKBPLQ9UIM3 349 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 KCND3Q9UK17 655 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 CROTQ9UKG9 612 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 KCTD3Q9Y597 815 aa20.44■□□□□ 0.86
SMPD1-204ENST00000530395 GOLGA6L3A6NEY3 463 aa20.43■□□□□ 0.86
SMPD1-204ENST00000530395 SOWAHDA6NJG2 315 aa20.43■□□□□ 0.86
SMPD1-204ENST00000530395 SPAG6O75602 509 aa20.43■□□□□ 0.86
SMPD1-204ENST00000530395 TJP3O95049 919 aa20.43■□□□□ 0.86
SMPD1-204ENST00000530395 SLC35G4P0C7Q5 338 aa20.43■□□□□ 0.86
SMPD1-204ENST00000530395 ADRA1AP35348 466 aa20.43■□□□□ 0.86
SMPD1-204ENST00000530395 PPP1CAP62136 330 aa20.43■□□□□ 0.86
SMPD1-204ENST00000530395 TUBB3Q13509 450 aa20.43■□□□□ 0.86
SMPD1-204ENST00000530395 DNTTIP2Q5QJE6 756 aaKnown RBP20.43■□□□□ 0.86
SMPD1-204ENST00000530395 PTRH1Q86Y79 214 aaKnown RBP20.43■□□□□ 0.86
SMPD1-204ENST00000530395 KMT5CQ86Y97 462 aa20.43■□□□□ 0.86
SMPD1-204ENST00000530395 OR2L2Q8NH16 312 aa20.43■□□□□ 0.86
SMPD1-204ENST00000530395 RNF31Q96EP0 1072 aa20.43■□□□□ 0.86
SMPD1-204ENST00000530395 SLC41A2Q96JW4 573 aa20.43■□□□□ 0.86
SMPD1-204ENST00000530395 C12orf66Q96MD2 445 aa20.43■□□□□ 0.86
SMPD1-204ENST00000530395 SPATA13Q96N96 652 aa20.43■□□□□ 0.86
SMPD1-204ENST00000530395 WWP1Q9H0M0 922 aa20.43■□□□□ 0.86
SMPD1-204ENST00000530395 SEMA5BQ9P283 1151 aa20.43■□□□□ 0.86
SMPD1-204ENST00000530395 CRLS1Q9UJA2 301 aa20.43■□□□□ 0.86
SMPD1-204ENST00000530395 RARRES3Q9UL19 164 aa20.43■□□□□ 0.86
SMPD1-204ENST00000530395 MRPS18BQ9Y676 258 aaKnown RBP20.43■□□□□ 0.86
SMPD1-204ENST00000530395 IGHV5-51A0A0C4DH38 117 aa20.42■□□□□ 0.86
SMPD1-204ENST00000530395 OR5K3A6NET4 321 aa20.42■□□□□ 0.86
SMPD1-204ENST00000530395 TLCD2A6NGC4 264 aa20.42■□□□□ 0.86
SMPD1-204ENST00000530395 PTMAP06454 111 aaKnown RBP20.42■□□□□ 0.86
SMPD1-204ENST00000530395 HADHAP40939 763 aa20.42■□□□□ 0.86
SMPD1-204ENST00000530395 ACY1Q03154 408 aa20.42■□□□□ 0.86
SMPD1-204ENST00000530395 BCL7AQ4VC05 210 aa20.42■□□□□ 0.86
SMPD1-204ENST00000530395 ARMC6Q6NXE6 501 aa20.42■□□□□ 0.86
SMPD1-204ENST00000530395 BPHLQ86WA6 291 aaPredicted RBP20.42■□□□□ 0.86
SMPD1-204ENST00000530395 OOSP2Q86WS3 158 aa20.42■□□□□ 0.86
SMPD1-204ENST00000530395 ZFPM2Q8WW38 1151 aa20.42■□□□□ 0.86
SMPD1-204ENST00000530395 INSM2Q96T92 566 aaPredicted RBP20.42■□□□□ 0.86
SMPD1-204ENST00000530395 HRASLS2Q9NWW9 162 aa20.42■□□□□ 0.86
SMPD1-204ENST00000530395 FAM8A1Q9UBU6 413 aa20.42■□□□□ 0.86
SMPD1-204ENST00000530395 FEZ2Q9UHY8 353 aaPredicted RBP20.42■□□□□ 0.86
SMPD1-204ENST00000530395 PADI1Q9ULC6 663 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms