RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 INTS10Q9NVR2 710 aaKnown RBP7.35□□□□□ -1.23
C11orf54-207ENST00000528288 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.35□□□□□ -1.23
C11orf54-207ENST00000528288 LEF1Q9UJU2 399 aaPredicted RBP7.35□□□□□ -1.23
C11orf54-207ENST00000528288 FAF1Q9UNN5 650 aaPredicted RBP7.35□□□□□ -1.23
C11orf54-207ENST00000528288 CDH23Q9H251 3354 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 SYCE1LA8MT33 242 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 OR7A17O14581 309 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 SMAD6O43541 496 aaKnown RBP7.35□□□□□ -1.23
C11orf54-207ENST00000528288 SH3BGRLO75368 114 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 MATN4O95460 622 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 CD160O95971 181 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 SLC11A2P49281 568 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 EMP3P54852 163 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 FCGRTP55899 365 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 ERVK-8P63133 956 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 FOXD4Q12950 439 aaPredicted RBP7.35□□□□□ -1.23
C11orf54-207ENST00000528288 BNIP2Q12982 314 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 RAB39AQ14964 217 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 NKG7Q16617 165 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 LDLRAP1Q5SW96 308 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 CCSAPQ6IQ19 270 aaPredicted RBP7.35□□□□□ -1.23
C11orf54-207ENST00000528288 TRAF7Q6Q0C0 670 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 GALNT7Q86SF2 657 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 SAPCD2Q86UD0 394 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 RNF175Q8N4F7 328 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 AUTS2Q8WXX7 1259 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 NSMCE2Q96MF7 247 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 NPLQ9BXD5 320 aaPredicted RBP7.35□□□□□ -1.23
C11orf54-207ENST00000528288 TNKS2Q9H2K2 1166 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 SLC6A13Q9NSD5 602 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 OLA1Q9NTK5 396 aaKnown RBP7.35□□□□□ -1.23
C11orf54-207ENST00000528288 SMPD3Q9NY59 655 aaPredicted RBP7.35□□□□□ -1.23
C11orf54-207ENST00000528288 VAPAQ9P0L0 249 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 KLQ9UEF7 1012 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 PCDHB7Q9Y5E2 793 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 UNC80Q8N2C7 3258 aa7.35□□□□□ -1.23
C11orf54-207ENST00000528288 CASP8AP2Q9UKL3 1982 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 ARVCFO00192 962 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 KDELR3O43731 214 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 TBL1XO60907 577 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 STC2O76061 302 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 KCNH1O95259 989 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 RASAL1O95294 804 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 SEC24AO95486 1093 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 EPOP01588 193 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 EFNA1P20827 205 aaPredicted RBP7.34□□□□□ -1.23
C11orf54-207ENST00000528288 HMOX2P30519 316 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 RHOAP61586 193 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 ESRRGP62508 458 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 IL1RL1Q01638 556 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 BNIP3Q12983 259 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 GPR17Q13304 367 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 TAF12Q16514 161 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 XKR7Q5GH72 579 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 PRMT9Q6P2P2 845 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 GALNT10Q86SR1 603 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 NKAPQ8N5F7 415 aaKnown RBP7.34□□□□□ -1.23
C11orf54-207ENST00000528288 TMBIM1Q969X1 311 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.34□□□□□ -1.23
C11orf54-207ENST00000528288 DUS3LQ96G46 650 aaKnown RBP7.34□□□□□ -1.23
C11orf54-207ENST00000528288 SCLYQ96I15 445 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 ASB2Q96Q27 587 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 MAGEH1Q9H213 219 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 VPS4AQ9UN37 437 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 PHF24Q9UPV7 400 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 A0A087WXM4 84 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 EEDO75530 441 aaKnown RBP7.34□□□□□ -1.23
C11orf54-207ENST00000528288 LRATO95237 230 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 PENKP01210 267 aaPredicted RBP7.34□□□□□ -1.23
C11orf54-207ENST00000528288 CR2P20023 1033 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 MYF6P23409 242 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 PSMD7P51665 324 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 NEK2P51955 445 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 PRKG2Q13237 762 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 GTF2H2Q13888 395 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 FAM174BQ3ZCQ3 159 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 GTF2H2CQ6P1K8 395 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 KLHL35Q6PF15 583 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 DLEU7Q6UYE1 221 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 RFLNAQ6ZTI6 216 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 SPATA19Q7Z5L4 167 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 SERPINA9Q86WD7 417 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 C10orf111Q8N326 155 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 FBXO22Q8NEZ5 403 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 BPIFB6Q8NFQ5 453 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 SKA2Q8WVK7 121 aaPredicted RBP7.34□□□□□ -1.23
C11orf54-207ENST00000528288 NTN4Q9HB63 628 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 IL37Q9NZH6 218 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 FNIP2Q9P278 1114 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 LIMD1Q9UGP4 676 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 LRFN2Q9ULH4 789 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 INVSQ9Y283 1065 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 ANGPTL3Q9Y5C1 460 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 SLC30A1Q9Y6M5 507 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 GSTA4O15217 222 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 NBNO60934 754 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 SLC25A14O95258 325 aaPredicted RBP7.34□□□□□ -1.23
C11orf54-207ENST00000528288 CLDN7O95471 211 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 EOMESO95936 686 aa7.34□□□□□ -1.23
C11orf54-207ENST00000528288 F11P03951 625 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms