RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 CEBPBP17676 345 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 PTPN2P17706 415 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 HDCP19113 662 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 CTSSP25774 331 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 CDC25CP30307 473 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 HTR7P34969 479 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 ACVRL1P37023 503 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 FDFT1P37268 417 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 GRIA1P42261 906 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 MAGEA4P43358 317 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 PPP3CCP48454 512 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 ALDH9A1P49189 494 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 LMAN1P49257 510 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 SLC11A2P49281 568 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 HARS2P49590 506 aaKnown RBP4.18□□□□□ -1.74
CD44-226ENST00000527889 PAPOLAP51003 745 aaKnown RBP4.18□□□□□ -1.74
CD44-226ENST00000527889 CSE1LP55060 971 aaKnown RBP4.18□□□□□ -1.74
CD44-226ENST00000527889 SUMO3P55854 103 aaPredicted RBP4.18□□□□□ -1.74
CD44-226ENST00000527889 ARL4CP56559 192 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 BPIFB3P59826 476 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 PPARDQ03181 441 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 SLC29A2Q14542 456 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 TEAD2Q15562 447 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 KYNUQ16719 465 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 SLC5A9Q2M3M2 681 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 KRT71Q3SY84 523 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 KHDC1Q4VXA5 237 aaKnown RBP4.18□□□□□ -1.74
CD44-226ENST00000527889 PABPC1LQ4VXU2 614 aaKnown RBP4.18□□□□□ -1.74
CD44-226ENST00000527889 TTMPQ5BVD1 217 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 CEP85LQ5SZL2 805 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 ARMC4Q5T2S8 1044 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 KIAA1614Q5VZ46 1190 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 ALS2CLQ60I27 953 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 AFMIDQ63HM1 303 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 KANK2Q63ZY3 851 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 DENND2CQ68D51 928 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 TRIM68Q6AZZ1 485 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 FAAH2Q6GMR7 532 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 LIPIQ6XZB0 460 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 LEKR1Q6ZMV7 388 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 Q6ZVL8 140 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 PID1Q7Z2X4 250 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 GRASPQ7Z6J2 395 aaPredicted RBP4.18□□□□□ -1.74
CD44-226ENST00000527889 SDCCAG8Q86SQ7 713 aaPredicted RBP4.18□□□□□ -1.74
CD44-226ENST00000527889 HOOK3Q86VS8 718 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 FAM129CQ86XR2 697 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 IGDCC3Q8IVU1 814 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 ZBED8Q8IZ13 594 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 IQCKQ8N0W5 287 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 KRT222Q8N1A0 295 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 UMODL1-AS1Q8N2C9 162 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 CELF5Q8N6W0 485 aaKnown RBP4.18□□□□□ -1.74
CD44-226ENST00000527889 NKAIN3Q8N8D7 197 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 NAXEQ8NCW5 288 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 PRSS33Q8NF86 280 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 OR7D4Q8NG98 312 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 OR5AN1Q8NGI8 311 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 OR52K2Q8NGK3 314 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 WFDC5Q8TCV5 224 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 BRSK1Q8TDC3 778 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 ING5Q8WYH8 240 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 ARHGEF2Q92974 986 aaKnown RBP4.18□□□□□ -1.74
CD44-226ENST00000527889 EXOC4Q96A65 974 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 HDAC11Q96DB2 347 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 TSPAN17Q96FV3 270 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 CFAP36Q96G28 342 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 ZNF419Q96HQ0 510 aaPredicted RBP4.18□□□□□ -1.74
CD44-226ENST00000527889 RSRC1Q96IZ7 334 aaKnown RBP4.18□□□□□ -1.74
CD44-226ENST00000527889 UBXN10Q96LJ8 280 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 PRICKLE1Q96MT3 831 aaPredicted RBP4.18□□□□□ -1.74
CD44-226ENST00000527889 MOGAT1Q96PD6 335 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 VRK1Q99986 396 aaPredicted RBP4.18□□□□□ -1.74
CD44-226ENST00000527889 GORASP1Q9BQQ3 440 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 WDR83Q9BRX9 315 aaKnown RBP4.18□□□□□ -1.74
CD44-226ENST00000527889 SLC46A2Q9BY10 475 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 GBA3Q9H227 469 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 PABPC3Q9H361 631 aaKnown RBP4.18□□□□□ -1.74
CD44-226ENST00000527889 CENPHQ9H3R5 247 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 TLE6Q9H808 572 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 VPS37BQ9H9H4 285 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 ITM2CQ9NQX7 267 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 TMEM248Q9NWD8 314 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 KCTD5Q9NXV2 234 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 OGFRQ9NZT2 677 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 CFAP97Q9P2B7 532 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 KLHL8Q9P2G9 620 aaPredicted RBP4.18□□□□□ -1.74
CD44-226ENST00000527889 DNMT3BQ9UBC3 853 aaKnown RBP4.18□□□□□ -1.74
CD44-226ENST00000527889 ZNF212Q9UDV6 495 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 RSPH14Q9UHP6 348 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 IPO11Q9UI26 975 aaKnown RBP4.18□□□□□ -1.74
CD44-226ENST00000527889 CDH22Q9UJ99 828 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 ADAMTS6Q9UKP5 1117 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 AGO1Q9UL18 857 aaKnown RBP4.18□□□□□ -1.74
CD44-226ENST00000527889 CHMP2BQ9UQN3 213 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 CCL26Q9Y258 94 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 SLC5A6Q9Y289 635 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 HCFC2Q9Y5Z7 792 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 ACTL7AQ9Y615 435 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 RAD54BQ9Y620 910 aa4.18□□□□□ -1.74
CD44-226ENST00000527889 NFS1Q9Y697 457 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms