RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 KLHDC8BQ8IXV7 354 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 SYCE1Q8N0S2 351 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 UBL4BQ8N7F7 174 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 LRRC57Q8N9N7 239 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 OR4K2Q8NGD2 314 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 OR2L2Q8NH16 312 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 UBXN4Q92575 508 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 ULK4Q96C45 1275 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 LINC00615Q96LM1 132 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-212ENST00000527887 FCRL4Q96PJ5 515 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 CD180Q99467 661 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 CTRCQ99895 268 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 FICDQ9BVA6 458 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 FAM117AQ9C073 453 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 ASB8Q9H765 288 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 GPN2Q9H9Y4 310 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-212ENST00000527887 APMAPQ9HDC9 416 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 AMFRQ9UKV5 643 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 WDR37Q9Y2I8 494 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 HEMK1Q9Y5R4 338 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-212ENST00000527887 ARL5AQ9Y689 179 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 DUSP10Q9Y6W6 482 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 TENM4Q6N022 2769 aa13.91□□□□□ -0.18
CAPN1-212ENST00000527887 SPTA1P02549 2419 aa13.9□□□□□ -0.18
CAPN1-212ENST00000527887 MACROD2A1Z1Q3 448 aa13.9□□□□□ -0.18
CAPN1-212ENST00000527887 F5H423 210 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-212ENST00000527887 BUD23O43709 281 aaKnown RBP13.9□□□□□ -0.18
CAPN1-212ENST00000527887 RASSF9O75901 435 aa13.9□□□□□ -0.18
CAPN1-212ENST00000527887 MT-ND3P03897 115 aa13.9□□□□□ -0.18
CAPN1-212ENST00000527887 ITGB6P18564 788 aa13.9□□□□□ -0.18
CAPN1-212ENST00000527887 NELFEP18615 380 aaKnown RBP13.9□□□□□ -0.18
CAPN1-212ENST00000527887 AKT1P31749 480 aa13.9□□□□□ -0.18
CAPN1-212ENST00000527887 CTSCP53634 463 aa13.9□□□□□ -0.18
CAPN1-212ENST00000527887 FOXM1Q08050 763 aa13.9□□□□□ -0.18
CAPN1-212ENST00000527887 RPE65Q16518 533 aa13.9□□□□□ -0.18
CAPN1-212ENST00000527887 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.9□□□□□ -0.18
CAPN1-212ENST00000527887 BCL7AQ4VC05 210 aa13.9□□□□□ -0.18
CAPN1-212ENST00000527887 CACHD1Q5VU97 1274 aa13.9□□□□□ -0.18
CAPN1-212ENST00000527887 TIPARPQ7Z3E1 657 aaKnown RBP13.9□□□□□ -0.18
CAPN1-212ENST00000527887 KMT5CQ86Y97 462 aa13.9□□□□□ -0.18
CAPN1-212ENST00000527887 CARFQ8N187 725 aa13.9□□□□□ -0.18
CAPN1-212ENST00000527887 DCUN1D1Q96GG9 259 aa13.9□□□□□ -0.18
CAPN1-212ENST00000527887 GORASP1Q9BQQ3 440 aa13.9□□□□□ -0.18
CAPN1-212ENST00000527887 CCM2Q9BSQ5 444 aa13.9□□□□□ -0.18
CAPN1-212ENST00000527887 TSGA10Q9BZW7 698 aa13.9□□□□□ -0.18
CAPN1-212ENST00000527887 LACRTQ9GZZ8 138 aa13.9□□□□□ -0.18
CAPN1-212ENST00000527887 SLC25A18Q9H1K4 315 aa13.9□□□□□ -0.18
CAPN1-212ENST00000527887 RRAGDQ9NQL2 400 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-212ENST00000527887 TRIM10Q9UDY6 481 aa13.9□□□□□ -0.18
CAPN1-212ENST00000527887 FLNBO75369 2602 aaKnown RBP13.9□□□□□ -0.18
CAPN1-212ENST00000527887 TLN1Q9Y490 2541 aaKnown RBP13.89□□□□□ -0.19
CAPN1-212ENST00000527887 LOC101059948A0A1B0GTJ6 334 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 C17orf113A0A1B0GUU1 675 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 OR2AG2A6NM03 316 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 CFAP99D6REC4 459 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 KRT86O43790 486 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 RECKO95980 971 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 FAM87AP0C7U9 286 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 FGF5P12034 268 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 PSMB4P28070 264 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 NDUFS1P28331 727 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 STAT5AP42229 794 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 CCR10P46092 362 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 LEPRP48357 1165 aaKnown RBP13.89□□□□□ -0.19
CAPN1-212ENST00000527887 ETF1P62495 437 aaKnown RBP13.89□□□□□ -0.19
CAPN1-212ENST00000527887 CYP4F2P78329 520 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 KIF5AQ12840 1032 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 NFATC3Q12968 1075 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 MSLNQ13421 630 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-212ENST00000527887 NFE2L1Q14494 772 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 PARP6Q2NL67 630 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 GPR33Q49SQ1 333 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 FNBP1LQ5T0N5 605 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 C6orf15Q6UXA7 325 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-212ENST00000527887 PEX26Q7Z412 305 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 KIAA1328Q86T90 577 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 RSC1A1Q92681 617 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 OR6C1Q96RD1 312 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 ULBP3Q9BZM4 244 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 C10orf88Q9H8K7 445 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 PDE7BQ9NP56 450 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 ASH1LQ9NR48 2969 aaKnown RBP13.89□□□□□ -0.19
CAPN1-212ENST00000527887 REXO2Q9Y3B8 237 aaKnown RBP13.89□□□□□ -0.19
CAPN1-212ENST00000527887 HEBP2Q9Y5Z4 205 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 COLEC10Q9Y6Z7 277 aa13.89□□□□□ -0.19
CAPN1-212ENST00000527887 GRID2IPA4D2P6 1211 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 H7C0S8 307 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 PSMD3O43242 534 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 SLC28A2O43868 658 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 GSTM1P09488 218 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 MTHFD1P11586 935 aaKnown RBP13.88□□□□□ -0.19
CAPN1-212ENST00000527887 ITGALP20701 1170 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 SEPHS1P49903 392 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 XIAPP98170 497 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 GSTM4Q03013 218 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 ACY1Q03154 408 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 DENND5AQ6IQ26 1287 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 IRGCQ6NXR0 463 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 FAM83HQ6ZRV2 1179 aaPredicted RBP13.88□□□□□ -0.19
CAPN1-212ENST00000527887 SNX20Q7Z614 316 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms