RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 OR4F6Q8NGB9 312 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 OR2AP1Q8NGE2 309 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 OR6K2Q8NGY2 324 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 PROKR1Q8TCW9 393 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 UBTD2Q8WUN7 234 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 BOCQ9BWV1 1114 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 ALG2Q9H553 416 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 RDH14Q9HBH5 336 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 C8orf4Q9NR00 106 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 PAPOLBQ9NRJ5 636 aaKnown RBP15.12■□□□□ 0.01
USH1C-207ENST00000527720 KLHL42Q9P2K6 505 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 CRLS1Q9UJA2 301 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 C9JVG2 144 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 AKAP10O43572 662 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 ZNF821O75541 412 aaPredicted RBP15.12■□□□□ 0.01
USH1C-207ENST00000527720 UMPSP11172 480 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 RPL5P46777 297 aaKnown RBP15.12■□□□□ 0.01
USH1C-207ENST00000527720 SNRPD1P62314 119 aaKnown RBP15.12■□□□□ 0.01
USH1C-207ENST00000527720 CYP4F8P98187 520 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 MYBPC1Q00872 1141 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 TRAF3Q13114 568 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 TTLL9Q3SXZ7 439 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 TBCELQ5QJ74 424 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 GPRC6AQ5T6X5 926 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 INTS11Q5TA45 600 aaKnown RBP15.12■□□□□ 0.01
USH1C-207ENST00000527720 SULT1C3Q6IMI6 304 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 SLC30A9Q6PML9 568 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 IL27RAQ6UWB1 636 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 SCIMPQ6UWF3 145 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 GALNT13Q8IUC8 556 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 BBS7Q8IWZ6 715 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 GALNT15Q8N3T1 639 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 SFRP1Q8N474 314 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 FIBCD1Q8N539 461 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 ZFAND2BQ8WV99 257 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 NCSTNQ92542 709 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 BHMTQ93088 406 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 VPS33AQ96AX1 596 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 ISG20Q96AZ6 181 aaKnown RBP15.12■□□□□ 0.01
USH1C-207ENST00000527720 CDK15Q96Q40 435 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 C1orf50Q9BV19 199 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 RNF208Q9H0X6 261 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 IPPKQ9H8X2 491 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 PIDD1Q9HB75 910 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 SAGE1Q9NXZ1 904 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 CFAP97Q9P2B7 532 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 LZTS1Q9Y250 596 aa15.12■□□□□ 0.01
USH1C-207ENST00000527720 TRAV19A0A0A6YYK7 116 aa15.11■□□□□ 0.01
USH1C-207ENST00000527720 C7orf72A4D263 438 aa15.11■□□□□ 0.01
USH1C-207ENST00000527720 ARNTLO00327 626 aa15.11■□□□□ 0.01
USH1C-207ENST00000527720 LSM1O15116 133 aaKnown RBP15.11■□□□□ 0.01
USH1C-207ENST00000527720 ARPC2O15144 300 aa15.11■□□□□ 0.01
USH1C-207ENST00000527720 TIPRLO75663 272 aa15.11■□□□□ 0.01
USH1C-207ENST00000527720 CLPTM1O96005 669 aa15.11■□□□□ 0.01
USH1C-207ENST00000527720 ENO2P09104 434 aaPredicted RBP15.11■□□□□ 0.01
USH1C-207ENST00000527720 CBSLP0DN79 551 aa15.11■□□□□ 0.01
USH1C-207ENST00000527720 FCGR1AP12314 374 aa15.11■□□□□ 0.01
USH1C-207ENST00000527720 CBSP35520 551 aa15.11■□□□□ 0.01
USH1C-207ENST00000527720 GSK3BP49841 420 aa15.11■□□□□ 0.01
USH1C-207ENST00000527720 FXNQ16595 210 aa15.11■□□□□ 0.01
USH1C-207ENST00000527720 NRF1Q16656 503 aa15.11■□□□□ 0.01
USH1C-207ENST00000527720 PAGE3Q5JUK9 113 aa15.11■□□□□ 0.01
USH1C-207ENST00000527720 ZBTB49Q6ZSB9 765 aa15.11■□□□□ 0.01
USH1C-207ENST00000527720 TMC8Q8IU68 726 aa15.11■□□□□ 0.01
USH1C-207ENST00000527720 SPPL2CQ8IUH8 684 aa15.11■□□□□ 0.01
USH1C-207ENST00000527720 NXPE1Q8N323 547 aa15.11■□□□□ 0.01
USH1C-207ENST00000527720 PPP3R2Q96LZ3 170 aa15.11■□□□□ 0.01
USH1C-207ENST00000527720 KCTD14Q9BQ13 255 aaPredicted RBP15.11■□□□□ 0.01
USH1C-207ENST00000527720 LRRC3Q9BY71 257 aa15.11■□□□□ 0.01
USH1C-207ENST00000527720 GMPR2Q9P2T1 348 aaKnown RBP15.11■□□□□ 0.01
USH1C-207ENST00000527720 PPIL1Q9Y3C6 166 aa15.11■□□□□ 0.01
USH1C-207ENST00000527720 PRSS21Q9Y6M0 314 aa15.11■□□□□ 0.01
USH1C-207ENST00000527720 SLC4A7Q9Y6M7 1214 aa15.11■□□□□ 0.01
USH1C-207ENST00000527720 MTCL1Q9Y4B5 1905 aaKnown RBP15.1■□□□□ 0.01
USH1C-207ENST00000527720 TAPBPO15533 448 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 LRG1P02750 347 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 CCL5P13501 91 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 HMOX2P30519 316 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 ARL1P40616 181 aaPredicted RBP15.1■□□□□ 0.01
USH1C-207ENST00000527720 SH3BGRP55822 239 aaPredicted RBP15.1■□□□□ 0.01
USH1C-207ENST00000527720 CHRNA6Q15825 494 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 ADRM1Q16186 407 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 CNPY1Q3B7I2 92 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 TTC23LQ6PF05 361 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 TPRG1Q6ZUI0 275 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 MILR1Q7Z6M3 343 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 AMIGO2Q86SJ2 522 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 DNAJB14Q8TBM8 379 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 LKAAEAR1Q8TD35 194 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 CIB1Q99828 191 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 C17orf80Q9BSJ5 609 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 NSUN3Q9H649 340 aaKnown RBP15.1■□□□□ 0.01
USH1C-207ENST00000527720 AGPAT4Q9NRZ5 378 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 EGFL7Q9UHF1 273 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 ENO4A6NNW6 628 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 EIF3FO00303 357 aaPredicted RBP15.1■□□□□ 0.01
USH1C-207ENST00000527720 EFCAB14O75071 495 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 WDR47O94967 919 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 TRIM16O95361 564 aa15.1■□□□□ 0.01
USH1C-207ENST00000527720 FASP25445 335 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms