RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 TUBB3Q13509 450 aa21.9■■□□□ 1.1
TRAPPC4-208ENST00000527680 SPA17Q15506 151 aa21.9■■□□□ 1.1
TRAPPC4-208ENST00000527680 LACTB2Q53H82 288 aaPredicted RBP21.9■■□□□ 1.1
TRAPPC4-208ENST00000527680 ARMC6Q6NXE6 501 aa21.9■■□□□ 1.1
TRAPPC4-208ENST00000527680 BEND7Q8N7W2 519 aaPredicted RBP21.9■■□□□ 1.1
TRAPPC4-208ENST00000527680 ZNF514Q96K75 400 aaPredicted RBP21.9■■□□□ 1.1
TRAPPC4-208ENST00000527680 QKIQ96PU8 341 aaKnown RBP eCLIP21.9■■□□□ 1.1
TRAPPC4-208ENST00000527680 FICDQ9BVA6 458 aa21.9■■□□□ 1.1
TRAPPC4-208ENST00000527680 POLHQ9Y253 713 aa21.9■■□□□ 1.1
TRAPPC4-208ENST00000527680 ARL5AQ9Y689 179 aa21.9■■□□□ 1.1
TRAPPC4-208ENST00000527680 KCNMB2Q9Y691 235 aa21.9■■□□□ 1.1
TRAPPC4-208ENST00000527680 CDC14CA4D256 554 aa21.89■■□□□ 1.09
TRAPPC4-208ENST00000527680 FOLR1P15328 257 aa21.89■■□□□ 1.09
TRAPPC4-208ENST00000527680 LPOP22079 712 aaPredicted RBP21.89■■□□□ 1.09
TRAPPC4-208ENST00000527680 RBL1P28749 1068 aa21.89■■□□□ 1.09
TRAPPC4-208ENST00000527680 MARCKSL1P49006 195 aa21.89■■□□□ 1.09
TRAPPC4-208ENST00000527680 KRT33BQ14525 404 aa21.89■■□□□ 1.09
TRAPPC4-208ENST00000527680 GSE1Q14687 1217 aa21.89■■□□□ 1.09
TRAPPC4-208ENST00000527680 KCNAB1Q14722 419 aa21.89■■□□□ 1.09
TRAPPC4-208ENST00000527680 DNTTIP2Q5QJE6 756 aaKnown RBP21.89■■□□□ 1.09
TRAPPC4-208ENST00000527680 METRNLQ641Q3 311 aa21.89■■□□□ 1.09
TRAPPC4-208ENST00000527680 ITPRIPL1Q6GPH6 555 aa21.89■■□□□ 1.09
TRAPPC4-208ENST00000527680 DAAM2Q86T65 1068 aa21.89■■□□□ 1.09
TRAPPC4-208ENST00000527680 C12orf66Q96MD2 445 aa21.89■■□□□ 1.09
TRAPPC4-208ENST00000527680 MAP3K3Q99759 626 aa21.89■■□□□ 1.09
TRAPPC4-208ENST00000527680 TWSG1Q9GZX9 223 aa21.89■■□□□ 1.09
TRAPPC4-208ENST00000527680 WWP1Q9H0M0 922 aa21.89■■□□□ 1.09
TRAPPC4-208ENST00000527680 ASB8Q9H765 288 aa21.89■■□□□ 1.09
TRAPPC4-208ENST00000527680 HRASLS2Q9NWW9 162 aa21.89■■□□□ 1.09
TRAPPC4-208ENST00000527680 TFR2Q9UP52 801 aa21.89■■□□□ 1.09
TRAPPC4-208ENST00000527680 PCDHA13Q9Y5I0 950 aa21.89■■□□□ 1.09
TRAPPC4-208ENST00000527680 MACROD2A1Z1Q3 448 aa21.88■■□□□ 1.09
TRAPPC4-208ENST00000527680 MKRN2OSH3BPM6 223 aa21.88■■□□□ 1.09
TRAPPC4-208ENST00000527680 PRAMEF1O95521 474 aa21.88■■□□□ 1.09
TRAPPC4-208ENST00000527680 MTHFD1P11586 935 aaKnown RBP21.88■■□□□ 1.09
TRAPPC4-208ENST00000527680 CTNNA2P26232 953 aa21.88■■□□□ 1.09
TRAPPC4-208ENST00000527680 ACY1Q03154 408 aa21.88■■□□□ 1.09
TRAPPC4-208ENST00000527680 TBX2Q13207 712 aaPredicted RBP21.88■■□□□ 1.09
TRAPPC4-208ENST00000527680 DNASE1L3Q13609 305 aa21.88■■□□□ 1.09
TRAPPC4-208ENST00000527680 PRPSAP1Q14558 356 aa21.88■■□□□ 1.09
TRAPPC4-208ENST00000527680 IGFBP7Q16270 282 aa21.88■■□□□ 1.09
TRAPPC4-208ENST00000527680 PWWP2BQ6NUJ5 590 aa21.88■■□□□ 1.09
TRAPPC4-208ENST00000527680 OR4K2Q8NGD2 314 aa21.88■■□□□ 1.09
TRAPPC4-208ENST00000527680 INSM2Q96T92 566 aaPredicted RBP21.88■■□□□ 1.09
TRAPPC4-208ENST00000527680 LUC7LQ9NQ29 371 aaKnown RBP21.88■■□□□ 1.09
TRAPPC4-208ENST00000527680 LHX9Q9NQ69 397 aa21.88■■□□□ 1.09
TRAPPC4-208ENST00000527680 ACSL5Q9ULC5 683 aa21.88■■□□□ 1.09
TRAPPC4-208ENST00000527680 MGAT4DA6NG13 374 aa21.87■■□□□ 1.09
TRAPPC4-208ENST00000527680 CREG1O75629 220 aa21.87■■□□□ 1.09
TRAPPC4-208ENST00000527680 NTRK1P04629 796 aa21.87■■□□□ 1.09
TRAPPC4-208ENST00000527680 POLBP06746 335 aa21.87■■□□□ 1.09
TRAPPC4-208ENST00000527680 NAP1L1P55209 391 aaKnown RBP21.87■■□□□ 1.09
TRAPPC4-208ENST00000527680 TAF1AQ15573 450 aaPredicted RBP21.87■■□□□ 1.09
TRAPPC4-208ENST00000527680 COLEC12Q5KU26 742 aa21.87■■□□□ 1.09
TRAPPC4-208ENST00000527680 BBS12Q6ZW61 710 aa21.87■■□□□ 1.09
TRAPPC4-208ENST00000527680 BPHLQ86WA6 291 aaPredicted RBP21.87■■□□□ 1.09
TRAPPC4-208ENST00000527680 CT55Q8WUE5 264 aa21.87■■□□□ 1.09
TRAPPC4-208ENST00000527680 NAT14Q8WUY8 206 aa21.87■■□□□ 1.09
TRAPPC4-208ENST00000527680 KRT35Q92764 455 aa21.87■■□□□ 1.09
TRAPPC4-208ENST00000527680 DCUN1D1Q96GG9 259 aa21.87■■□□□ 1.09
TRAPPC4-208ENST00000527680 SLC41A2Q96JW4 573 aa21.87■■□□□ 1.09
TRAPPC4-208ENST00000527680 APOL2Q9BQE5 337 aa21.87■■□□□ 1.09
TRAPPC4-208ENST00000527680 TRIM5Q9C035 493 aa21.87■■□□□ 1.09
TRAPPC4-208ENST00000527680 GBA3Q9H227 469 aa21.87■■□□□ 1.09
TRAPPC4-208ENST00000527680 TP53TG5Q9Y2B4 290 aa21.87■■□□□ 1.09
TRAPPC4-208ENST00000527680 BSNQ9UPA5 3926 aa21.87■■□□□ 1.09
TRAPPC4-208ENST00000527680 OR5K3A6NET4 321 aa21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 C5orf60A6NFR6 353 aa21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 APOC4-APOC2K7ER74 178 aa21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 GAPDHSO14556 408 aaPredicted RBP21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 SRP72O76094 671 aaKnown RBP21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 STK10O94804 968 aaKnown RBP21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 TIAF1O95411 115 aa21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 APOC2P02655 101 aa21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 FURINP09958 794 aa21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 EBLN1P0CF75 366 aa21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 HSD11B2P80365 405 aa21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 PDE1BQ01064 536 aa21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 TMEM135Q86UB9 458 aa21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 OOSP2Q86WS3 158 aa21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 KMT5CQ86Y97 462 aa21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 CFAP206Q8IYR0 622 aa21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 TEX19Q8NA77 164 aa21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 OR2L2Q8NH16 312 aa21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 FCRL4Q96PJ5 515 aa21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 CD180Q99467 661 aa21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 FGF21Q9NSA1 209 aa21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 SMOXQ9NWM0 555 aa21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 FKBPLQ9UIM3 349 aa21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 CRLS1Q9UJA2 301 aa21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 AAR2Q9Y312 384 aaKnown RBP21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 COLEC10Q9Y6Z7 277 aa21.86■■□□□ 1.09
TRAPPC4-208ENST00000527680 OR6C74A6NCV1 312 aa21.85■■□□□ 1.09
TRAPPC4-208ENST00000527680 GOLGA6L3A6NEY3 463 aa21.85■■□□□ 1.09
TRAPPC4-208ENST00000527680 TLCD2A6NGC4 264 aa21.85■■□□□ 1.09
TRAPPC4-208ENST00000527680 SLC35G4P0C7Q5 338 aa21.85■■□□□ 1.09
TRAPPC4-208ENST00000527680 RALBP11234 206 aa21.85■■□□□ 1.09
TRAPPC4-208ENST00000527680 KLRB1Q12918 225 aa21.85■■□□□ 1.09
TRAPPC4-208ENST00000527680 TMTC4Q5T4D3 741 aa21.85■■□□□ 1.09
TRAPPC4-208ENST00000527680 C11orf63Q6NUN7 778 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms