RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 TSTD2Q5T7W7 516 aa25.82■■□□□ 1.72
TSPAN4-217ENST00000527644 TMEM164Q5U3C3 297 aa25.82■■□□□ 1.72
TSPAN4-217ENST00000527644 BROXQ5VW32 411 aa25.82■■□□□ 1.72
TSPAN4-217ENST00000527644 ARHGAP22Q7Z5H3 698 aa25.82■■□□□ 1.72
TSPAN4-217ENST00000527644 PDZD3Q86UT5 571 aa25.82■■□□□ 1.72
TSPAN4-217ENST00000527644 PIANPQ8IYJ0 282 aa25.82■■□□□ 1.72
TSPAN4-217ENST00000527644 SLC35F6Q8N357 371 aa25.82■■□□□ 1.72
TSPAN4-217ENST00000527644 OR13J1Q8NGT2 312 aa25.82■■□□□ 1.72
TSPAN4-217ENST00000527644 NAP1L3Q99457 506 aaPredicted RBP25.82■■□□□ 1.72
TSPAN4-217ENST00000527644 PRAMEF33A0A0G2JMD5 474 aa25.81■■□□□ 1.72
TSPAN4-217ENST00000527644 AP3B1O00203 1094 aa25.81■■□□□ 1.72
TSPAN4-217ENST00000527644 KIF5CO60282 957 aa25.81■■□□□ 1.72
TSPAN4-217ENST00000527644 PRSS56P0CW18 603 aa25.81■■□□□ 1.72
TSPAN4-217ENST00000527644 FGF3P11487 239 aaPredicted RBP25.81■■□□□ 1.72
TSPAN4-217ENST00000527644 SNAP47Q5SQN1 464 aa25.81■■□□□ 1.72
TSPAN4-217ENST00000527644 CFAP206Q8IYR0 622 aa25.81■■□□□ 1.72
TSPAN4-217ENST00000527644 HM13Q8TCT9 377 aa25.81■■□□□ 1.72
TSPAN4-217ENST00000527644 PEX13Q92968 403 aa25.81■■□□□ 1.72
TSPAN4-217ENST00000527644 PDLIM2Q96JY6 352 aa25.81■■□□□ 1.72
TSPAN4-217ENST00000527644 VPS37BQ9H9H4 285 aa25.81■■□□□ 1.72
TSPAN4-217ENST00000527644 TRMT1Q9NXH9 659 aaKnown RBP25.81■■□□□ 1.72
TSPAN4-217ENST00000527644 OGFRQ9NZT2 677 aa25.81■■□□□ 1.72
TSPAN4-217ENST00000527644 TCAF1Q9Y4C2 921 aa25.81■■□□□ 1.72
TSPAN4-217ENST00000527644 PTPRQQ9UMZ3 2332 aa25.8■■□□□ 1.72
TSPAN4-217ENST00000527644 CCDC162PA2VCL2 907 aa25.8■■□□□ 1.72
TSPAN4-217ENST00000527644 C9orf172C9J069 976 aa25.8■■□□□ 1.72
TSPAN4-217ENST00000527644 PRAMEF10O60809 474 aa25.8■■□□□ 1.72
TSPAN4-217ENST00000527644 TYRP1P17643 537 aa25.8■■□□□ 1.72
TSPAN4-217ENST00000527644 UCNP55089 124 aa25.8■■□□□ 1.72
TSPAN4-217ENST00000527644 ACVR1Q04771 509 aa25.8■■□□□ 1.72
TSPAN4-217ENST00000527644 ITIH4Q14624 930 aa25.8■■□□□ 1.72
TSPAN4-217ENST00000527644 DBN1Q16643 649 aa25.8■■□□□ 1.72
TSPAN4-217ENST00000527644 MICALCLQ6ZW33 695 aa25.8■■□□□ 1.72
TSPAN4-217ENST00000527644 PPHLN1Q8NEY8 458 aaKnown RBP25.8■■□□□ 1.72
TSPAN4-217ENST00000527644 HDAC10Q969S8 669 aa25.8■■□□□ 1.72
TSPAN4-217ENST00000527644 CRELD1Q96HD1 420 aa25.8■■□□□ 1.72
TSPAN4-217ENST00000527644 MS4A14Q96JA4 679 aa25.8■■□□□ 1.72
TSPAN4-217ENST00000527644 TAAR9Q96RI9 348 aa25.8■■□□□ 1.72
TSPAN4-217ENST00000527644 CCM2Q9BSQ5 444 aa25.8■■□□□ 1.72
TSPAN4-217ENST00000527644 WWP1Q9H0M0 922 aa25.8■■□□□ 1.72
TSPAN4-217ENST00000527644 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.8■■□□□ 1.72
TSPAN4-217ENST00000527644 SSUH2Q9Y2M2 353 aa25.8■■□□□ 1.72
TSPAN4-217ENST00000527644 MN1Q10571 1320 aaPredicted RBP25.8■■□□□ 1.72
TSPAN4-217ENST00000527644 A8MU76 341 aa25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 B4E171 279 aa25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 AP2A2O94973 939 aa25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 C9P02748 559 aa25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 SLC35G4P0C7Q5 338 aa25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 MTHFD1P11586 935 aaKnown RBP25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 FOXN2P32314 431 aa25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 TSPAN7P41732 249 aa25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 CDK16Q00536 496 aa25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 PCID2Q5JVF3 399 aa25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 AFTPHQ6ULP2 937 aa25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 XKR5Q6UX68 686 aa25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 MAGOHBQ96A72 148 aaKnown RBP25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 INSM2Q96T92 566 aaPredicted RBP25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 PRORYQ9H606 182 aa25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 IMP3Q9NV31 184 aaKnown RBP25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 SMARCAL1Q9NZC9 954 aa25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 FAM8A1Q9UBU6 413 aa25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 SLC2A6Q9UGQ3 507 aa25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 PCDHGA3Q9Y5H0 932 aa25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 NBEAQ8NFP9 2946 aa25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 AHCTF1Q8WYP5 2266 aa25.79■■□□□ 1.72
TSPAN4-217ENST00000527644 OR51F1A6NGY5 319 aa25.78■■□□□ 1.72
TSPAN4-217ENST00000527644 PGRMC1O00264 195 aaKnown RBP25.78■■□□□ 1.72
TSPAN4-217ENST00000527644 GSTM1P09488 218 aa25.78■■□□□ 1.72
TSPAN4-217ENST00000527644 CD82P27701 267 aa25.78■■□□□ 1.72
TSPAN4-217ENST00000527644 NSG1P42857 185 aa25.78■■□□□ 1.72
TSPAN4-217ENST00000527644 NPY2RP49146 381 aa25.78■■□□□ 1.72
TSPAN4-217ENST00000527644 GSTM4Q03013 218 aa25.78■■□□□ 1.72
TSPAN4-217ENST00000527644 CLN3Q13286 438 aa25.78■■□□□ 1.72
TSPAN4-217ENST00000527644 LYPLAL1Q5VWZ2 237 aa25.78■■□□□ 1.72
TSPAN4-217ENST00000527644 GPR150Q8NGU9 434 aa25.78■■□□□ 1.72
TSPAN4-217ENST00000527644 ZFPM2Q8WW38 1151 aa25.78■■□□□ 1.72
TSPAN4-217ENST00000527644 SGSM3Q96HU1 749 aa25.78■■□□□ 1.72
TSPAN4-217ENST00000527644 C12orf66Q96MD2 445 aa25.78■■□□□ 1.72
TSPAN4-217ENST00000527644 ZNF778Q96MU6 729 aa25.78■■□□□ 1.72
TSPAN4-217ENST00000527644 OSBPL9Q96SU4 736 aa25.78■■□□□ 1.72
TSPAN4-217ENST00000527644 TTC1Q99614 292 aa25.78■■□□□ 1.72
TSPAN4-217ENST00000527644 AP1M1Q9BXS5 423 aa25.78■■□□□ 1.72
TSPAN4-217ENST00000527644 OCIAD1Q9NX40 245 aa25.78■■□□□ 1.72
TSPAN4-217ENST00000527644 BFARQ9NZS9 450 aa25.78■■□□□ 1.72
TSPAN4-217ENST00000527644 FOXJ2Q9P0K8 574 aa25.78■■□□□ 1.72
TSPAN4-217ENST00000527644 KLHL3Q9UH77 587 aa25.78■■□□□ 1.72
TSPAN4-217ENST00000527644 RALYQ9UKM9 306 aaKnown RBP25.78■■□□□ 1.72
TSPAN4-217ENST00000527644 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 EFCAB7A8K855 629 aa25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 QSOX1O00391 747 aa25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 GOT2P00505 430 aaKnown RBP25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 POLBP06746 335 aa25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 ANKRD34CP0C6C1 535 aa25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 TPSB2P20231 275 aa25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 CAPZBP47756 277 aa25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 TMPRSS3P57727 454 aa25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 SESN2P58004 480 aaPredicted RBP25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 TPSAB1Q15661 275 aa25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 CYP1B1Q16678 543 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms