RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 MED16Q9Y2X0 877 aa16.34■□□□□ 0.21
SMCO4-204ENST00000527149 C17orf113A0A1B0GUU1 675 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 UBA6A0AVT1 1052 aaPredicted RBP16.33■□□□□ 0.2
SMCO4-204ENST00000527149 KLHL33A6NCF5 533 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 IQCF5A8MTL0 148 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 GIPC1O14908 333 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 ESR1P03372 595 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 GSTA2P09210 222 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 GSTM1P09488 218 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 CKMT1AP12532 417 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 F3P13726 295 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 SDHBP21912 280 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 LEPRP48357 1165 aaKnown RBP16.33■□□□□ 0.2
SMCO4-204ENST00000527149 ACADVLP49748 655 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 GSTM4Q03013 218 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 AGAP9Q5VTM2 703 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 METRNLQ641Q3 311 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 ZNF549Q6P9A3 640 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 SFRP1Q8N474 314 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 ZDHHC1Q8WTX9 485 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 CDC6Q99741 560 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 CCM2Q9BSQ5 444 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 MCMBPQ9BTE3 642 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 TXLNGYQ9BZA5 131 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 DPEP2Q9H4A9 486 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 OSGEPL1Q9H4B0 414 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 SIRPGQ9P1W8 387 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 GNPTGQ9UJJ9 305 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 WDR37Q9Y2I8 494 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 CRYL1Q9Y2S2 319 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 PSAT1Q9Y617 370 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 CEP295Q9C0D2 2601 aa16.33■□□□□ 0.2
SMCO4-204ENST00000527149 COL27A1Q8IZC6 1860 aaPredicted RBP16.33■□□□□ 0.2
SMCO4-204ENST00000527149 FAM159BA6NKW6 160 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 CXorf49A8MYA2 514 aaPredicted RBP16.32■□□□□ 0.2
SMCO4-204ENST00000527149 NIPSNAP2O75323 286 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 PIAS1O75925 651 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 DKK1O94907 266 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 HAUS5O94927 633 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 LDOC1O95751 146 aaPredicted RBP16.32■□□□□ 0.2
SMCO4-204ENST00000527149 FTH1P02794 183 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 FAM153BP0C7A2 387 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 OR56A5P0C7T3 313 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 VCLP18206 1134 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 MAZP56270 477 aaKnown RBP16.32■□□□□ 0.2
SMCO4-204ENST00000527149 DNAJC3Q13217 504 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 FAM153CQ494X1 144 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 C14orf28Q4W4Y0 310 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 IYDQ6PHW0 289 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 CNSTQ6PJW8 725 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 ABRAXAS1Q6UWZ7 409 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 CEP128Q6ZU80 1094 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 PALM2Q8IXS6 379 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 KRT222Q8N1A0 295 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 SLC37A2Q8TED4 501 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 FUT8Q9BYC5 575 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 TSPYL1Q9H0U9 437 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 OR52A5Q9H2C5 316 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 CDC42EP4Q9H3Q1 356 aaKnown RBP16.32■□□□□ 0.2
SMCO4-204ENST00000527149 VPS37BQ9H9H4 285 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 FAM8A1Q9UBU6 413 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 CDYLQ9Y232 598 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 VPS9D1Q9Y2B5 631 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 PCDHB1Q9Y5F3 818 aa16.32■□□□□ 0.2
SMCO4-204ENST00000527149 SLC5A10A0PJK1 596 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 TNFSF14O43557 240 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 SNX2O60749 519 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 SPAG6O75602 509 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 KCNK5O95279 499 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 AHSGP02765 367 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 CEACAM1P13688 526 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 PKMP14618 531 aaKnown RBP16.31■□□□□ 0.2
SMCO4-204ENST00000527149 ITGB6P18564 788 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 IDSP22304 550 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 ACP1P24666 158 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 RPL10P27635 214 aaKnown RBP16.31■□□□□ 0.2
SMCO4-204ENST00000527149 FMO4P31512 558 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 CCR7P32248 378 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 ABCG1P45844 678 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 UBE2IP63279 158 aaKnown RBP16.31■□□□□ 0.2
SMCO4-204ENST00000527149 TIAL1Q01085 375 aaKnown RBP eCLIP16.31■□□□□ 0.2
SMCO4-204ENST00000527149 CLCA4Q14CN2 919 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 NR0B2Q15466 257 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 TRIP6Q15654 476 aaKnown RBP16.31■□□□□ 0.2
SMCO4-204ENST00000527149 KYNUQ16719 465 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 GUSBP11Q6P575 273 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 C3orf62Q6ZUJ4 267 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 ZNF438Q7Z4V0 828 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 RMDN2Q96LZ7 410 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 SLC32A1Q9H598 525 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 PPANQ9NQ55 473 aaKnown RBP16.31■□□□□ 0.2
SMCO4-204ENST00000527149 RRAGDQ9NQL2 400 aaPredicted RBP16.31■□□□□ 0.2
SMCO4-204ENST00000527149 NCKIPSDQ9NZQ3 722 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 ZFATQ9P243 1243 aa16.31■□□□□ 0.2
SMCO4-204ENST00000527149 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.31■□□□□ 0.2
SMCO4-204ENST00000527149 V9GYY5 206 aaPredicted RBP16.31■□□□□ 0.2
SMCO4-204ENST00000527149 SPAARA0A1B0GVQ0 90 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 DCDC2BA2VCK2 349 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 EME2A4GXA9 379 aaPredicted RBP16.3■□□□□ 0.2
SMCO4-204ENST00000527149 PDZK1P1A8MUH7 402 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms