RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 PSMA8Q8TAA3 256 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 DTD1Q8TEA8 209 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 TMEM40Q8WWA1 233 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 PGM2Q96G03 612 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 CALML4Q96GE6 196 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 RTKNQ9BST9 563 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 CHID1Q9BWS9 393 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 TBC1D10AQ9BXI6 508 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 EPC1Q9H2F5 836 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 ASB8Q9H765 288 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 FBRSL1Q9HCM7 1045 aaKnown RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 MYOZ1Q9NP98 299 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 IFT46Q9NQC8 304 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 TLR9Q9NR96 1032 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 THUMPD1Q9NXG2 353 aaKnown RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 CLDND1Q9NY35 253 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 SPASTQ9UBP0 616 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 RSL24D1Q9UHA3 163 aaKnown RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 GPN3Q9UHW5 284 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 STOML2Q9UJZ1 356 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 SLC6A14Q9UN76 642 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 ANKRD6Q9Y2G4 727 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 ZDHHC9Q9Y397 364 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 UTP11Q9Y3A2 253 aaKnown RBP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 NR2E1Q9Y466 385 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 PUS1Q9Y606 427 aaKnown RBP eCLIP7.45□□□□□ -1.22
HDAC3-216ENST00000523088 CPQQ9Y646 472 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 FKBP7Q9Y680 259 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 ZMYM2Q9UBW7 1377 aa7.45□□□□□ -1.22
HDAC3-216ENST00000523088 TDRD15B5MCY1 1934 aaKnown RBP7.44□□□□□ -1.22
HDAC3-216ENST00000523088 E5RI56 91 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 UBE2CO00762 179 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 HS6ST1O60243 411 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 EXOC3O60645 756 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 DCTN3O75935 186 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 NOL4O94818 638 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 FAM153BP0C7A2 387 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 TYMPP19971 482 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 AHCYP23526 432 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 MAGEA1P43355 309 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 NDUFV1P49821 464 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 GNG10P50151 68 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 LUMP51884 338 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-216ENST00000523088 NEK4P51957 841 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 VSNL1P62760 191 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 TRA2BP62995 288 aaKnown RBP7.44□□□□□ -1.22
HDAC3-216ENST00000523088 XIAPP98170 497 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 ATP2C1P98194 919 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-216ENST00000523088 CYP24A1Q07973 514 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 ELP6Q0PNE2 266 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 TFDP1Q14186 410 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 INPP5AQ14642 412 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 EMC2Q15006 297 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 SMAD2Q15796 467 aaKnown RBP7.44□□□□□ -1.22
HDAC3-216ENST00000523088 CALCRLQ16602 461 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 UGCGQ16739 394 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 PAN2Q504Q3 1202 aaKnown RBP7.44□□□□□ -1.22
HDAC3-216ENST00000523088 PDSS1Q5T2R2 415 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 DDI2Q5TDH0 399 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 NT5DC1Q5TFE4 455 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 RESP18Q5W5W9 173 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 ANKRD40Q6AI12 368 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 ZFP1Q6P2D0 407 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 GLB1LQ6UWU2 654 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 ECHDC2Q86YB7 292 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 SLC13A5Q86YT5 568 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-216ENST00000523088 ADHFE1Q8IWW8 467 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 ULK2Q8IYT8 1036 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 RNF113BQ8IZP6 322 aaKnown RBP7.44□□□□□ -1.22
HDAC3-216ENST00000523088 GJD3Q8N144 294 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 CPA6Q8N4T0 437 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 GLIS1Q8NBF1 620 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 COLGALT1Q8NBJ5 622 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 PNPT1Q8TCS8 783 aaKnown RBP7.44□□□□□ -1.22
HDAC3-216ENST00000523088 ADAMTS15Q8TE58 950 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 ROBO4Q8WZ75 1007 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 EXT2Q93063 718 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 DYDC2Q96IM9 177 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 LURAP1Q96LR2 239 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 HEXIM2Q96MH2 286 aaKnown RBP7.44□□□□□ -1.22
HDAC3-216ENST00000523088 KLHL5Q96PQ7 755 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 PNKPQ96T60 521 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 ZNF251Q9BRH9 671 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 LXNQ9BS40 222 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 METTL9Q9H1A3 318 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 PPA2Q9H2U2 334 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 NARFLQ9H6Q4 476 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 USP29Q9HBJ7 922 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 SEPSECSQ9HD40 501 aaKnown RBP7.44□□□□□ -1.22
HDAC3-216ENST00000523088 PRDM8Q9NQV8 689 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 GIMAP4Q9NUV9 329 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 DNAJC17Q9NVM6 304 aaKnown RBP7.44□□□□□ -1.22
HDAC3-216ENST00000523088 ZSCAN32Q9NX65 697 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 KLHL28Q9NXS3 571 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 COA4Q9NYJ1 87 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 COQ3Q9NZJ6 369 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 MPP6Q9NZW5 540 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 USP36Q9P275 1121 aaKnown RBP7.44□□□□□ -1.22
HDAC3-216ENST00000523088 KANSL3Q9P2N6 904 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 LIMD1Q9UGP4 676 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms