RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 GPN2Q9H9Y4 310 aaPredicted RBP20.27■□□□□ 0.84
SDCBP-209ENST00000522243 TMEM184BQ9Y519 407 aaPredicted RBP20.27■□□□□ 0.84
SDCBP-209ENST00000522243 GOLGA6L9A6NEM1 432 aa20.26■□□□□ 0.83
SDCBP-209ENST00000522243 MGAT4DA6NG13 374 aa20.26■□□□□ 0.83
SDCBP-209ENST00000522243 ZNF28P17035 718 aa20.26■□□□□ 0.83
SDCBP-209ENST00000522243 MAP4P27816 1152 aaKnown RBP20.26■□□□□ 0.83
SDCBP-209ENST00000522243 PLCL1Q15111 1095 aa20.26■□□□□ 0.83
SDCBP-209ENST00000522243 METRNLQ641Q3 311 aa20.26■□□□□ 0.83
SDCBP-209ENST00000522243 ARHGEF18Q6ZSZ5 1173 aa20.26■□□□□ 0.83
SDCBP-209ENST00000522243 SYCE1Q8N0S2 351 aa20.26■□□□□ 0.83
SDCBP-209ENST00000522243 TAB3Q8N5C8 712 aaPredicted RBP20.26■□□□□ 0.83
SDCBP-209ENST00000522243 ZDHHC12Q96GR4 267 aa20.26■□□□□ 0.83
SDCBP-209ENST00000522243 ZNF514Q96K75 400 aaPredicted RBP20.26■□□□□ 0.83
SDCBP-209ENST00000522243 R3HDM2Q9Y2K5 976 aaKnown RBP20.26■□□□□ 0.83
SDCBP-209ENST00000522243 TCRBV7S2A1N4TA0A589 114 aa20.25■□□□□ 0.83
SDCBP-209ENST00000522243 PYCARD-AS1I3L0S3 204 aa20.25■□□□□ 0.83
SDCBP-209ENST00000522243 TOX3O15405 576 aaPredicted RBP20.25■□□□□ 0.83
SDCBP-209ENST00000522243 NKX2-8O15522 239 aa20.25■□□□□ 0.83
SDCBP-209ENST00000522243 SGTAO43765 313 aa20.25■□□□□ 0.83
SDCBP-209ENST00000522243 METTL18O95568 372 aa20.25■□□□□ 0.83
SDCBP-209ENST00000522243 DLGAP3O95886 979 aa20.25■□□□□ 0.83
SDCBP-209ENST00000522243 POLBP06746 335 aa20.25■□□□□ 0.83
SDCBP-209ENST00000522243 MTHFD1P11586 935 aaKnown RBP20.25■□□□□ 0.83
SDCBP-209ENST00000522243 TPH1P17752 444 aa20.25■□□□□ 0.83
SDCBP-209ENST00000522243 ZNF140P52738 457 aaPredicted RBP20.25■□□□□ 0.83
SDCBP-209ENST00000522243 GDF10P55107 478 aa20.25■□□□□ 0.83
SDCBP-209ENST00000522243 PRSS42Q7Z5A4 293 aa20.25■□□□□ 0.83
SDCBP-209ENST00000522243 LILRA3Q8N6C8 439 aaPredicted RBP20.25■□□□□ 0.83
SDCBP-209ENST00000522243 TTC13Q8NBP0 860 aa20.25■□□□□ 0.83
SDCBP-209ENST00000522243 SPDYE1Q8NFV5 336 aaPredicted RBP20.25■□□□□ 0.83
SDCBP-209ENST00000522243 KIAA1143Q96AT1 154 aaPredicted RBP20.25■□□□□ 0.83
SDCBP-209ENST00000522243 DCUN1D1Q96GG9 259 aa20.25■□□□□ 0.83
SDCBP-209ENST00000522243 C12orf66Q96MD2 445 aa20.25■□□□□ 0.83
SDCBP-209ENST00000522243 ULBP3Q9BZM4 244 aa20.25■□□□□ 0.83
SDCBP-209ENST00000522243 EPHA6Q9UF33 1036 aa20.25■□□□□ 0.83
SDCBP-209ENST00000522243 IL17BQ9UHF5 180 aa20.25■□□□□ 0.83
SDCBP-209ENST00000522243 COL6A6A6NMZ7 2263 aa20.24■□□□□ 0.83
SDCBP-209ENST00000522243 ZNF891A8MT65 544 aaPredicted RBP20.24■□□□□ 0.83
SDCBP-209ENST00000522243 MIF4GDA9UHW6 222 aaKnown RBP20.24■□□□□ 0.83
SDCBP-209ENST00000522243 J3QKU1 62 aa20.24■□□□□ 0.83
SDCBP-209ENST00000522243 LDB2O43679 373 aa20.24■□□□□ 0.83
SDCBP-209ENST00000522243 ITGALP20701 1170 aa20.24■□□□□ 0.83
SDCBP-209ENST00000522243 MC4RP32245 332 aa20.24■□□□□ 0.83
SDCBP-209ENST00000522243 CDKN1CP49918 316 aaPredicted RBP20.24■□□□□ 0.83
SDCBP-209ENST00000522243 NFKB2Q00653 900 aa20.24■□□□□ 0.83
SDCBP-209ENST00000522243 PDE1BQ01064 536 aa20.24■□□□□ 0.83
SDCBP-209ENST00000522243 PARP6Q2NL67 630 aa20.24■□□□□ 0.83
SDCBP-209ENST00000522243 XKR5Q6UX68 686 aa20.24■□□□□ 0.83
SDCBP-209ENST00000522243 RASGRP3Q8IV61 690 aa20.24■□□□□ 0.83
SDCBP-209ENST00000522243 KLHDC8BQ8IXV7 354 aa20.24■□□□□ 0.83
SDCBP-209ENST00000522243 CFAP206Q8IYR0 622 aa20.24■□□□□ 0.83
SDCBP-209ENST00000522243 OR2L2Q8NH16 312 aa20.24■□□□□ 0.83
SDCBP-209ENST00000522243 KLHL6Q8WZ60 621 aa20.24■□□□□ 0.83
SDCBP-209ENST00000522243 DNAJC1Q96KC8 554 aaKnown RBP20.24■□□□□ 0.83
SDCBP-209ENST00000522243 PPP1R2P1Q96PQ5 205 aa20.24■□□□□ 0.83
SDCBP-209ENST00000522243 TMEM121Q9BTD3 319 aa20.24■□□□□ 0.83
SDCBP-209ENST00000522243 ARNT2Q9HBZ2 717 aa20.24■□□□□ 0.83
SDCBP-209ENST00000522243 PIH1D1Q9NWS0 290 aaKnown RBP20.24■□□□□ 0.83
SDCBP-209ENST00000522243 CAPN6Q9Y6Q1 641 aa20.24■□□□□ 0.83
SDCBP-209ENST00000522243 ATMQ13315 3056 aa20.24■□□□□ 0.83
SDCBP-209ENST00000522243 AGAP14A8MT82 685 aa20.23■□□□□ 0.83
SDCBP-209ENST00000522243 SLC28A2O43868 658 aa20.23■□□□□ 0.83
SDCBP-209ENST00000522243 PRSS56P0CW18 603 aa20.23■□□□□ 0.83
SDCBP-209ENST00000522243 PRKAR1AP10644 381 aa20.23■□□□□ 0.83
SDCBP-209ENST00000522243 ITGB6P18564 788 aa20.23■□□□□ 0.83
SDCBP-209ENST00000522243 HADHAP40939 763 aa20.23■□□□□ 0.83
SDCBP-209ENST00000522243 ABHD18Q0P651 414 aa20.23■□□□□ 0.83
SDCBP-209ENST00000522243 KLF1Q13351 362 aaPredicted RBP20.23■□□□□ 0.83
SDCBP-209ENST00000522243 BCL7AQ4VC05 210 aa20.23■□□□□ 0.83
SDCBP-209ENST00000522243 ZRANB3Q5FWF4 1079 aa20.23■□□□□ 0.83
SDCBP-209ENST00000522243 KCTD11Q693B1 232 aa20.23■□□□□ 0.83
SDCBP-209ENST00000522243 SNX20Q7Z614 316 aa20.23■□□□□ 0.83
SDCBP-209ENST00000522243 NXPE1Q8N323 547 aa20.23■□□□□ 0.83
SDCBP-209ENST00000522243 GALNT6Q8NCL4 622 aa20.23■□□□□ 0.83
SDCBP-209ENST00000522243 ULK4Q96C45 1275 aa20.23■□□□□ 0.83
SDCBP-209ENST00000522243 LRRC45Q96CN5 670 aa20.23■□□□□ 0.83
SDCBP-209ENST00000522243 SLC45A3Q96JT2 553 aa20.23■□□□□ 0.83
SDCBP-209ENST00000522243 MAP3K3Q99759 626 aa20.23■□□□□ 0.83
SDCBP-209ENST00000522243 RAB33BQ9H082 229 aa20.23■□□□□ 0.83
SDCBP-209ENST00000522243 TRIT1Q9H3H1 467 aaKnown RBP20.23■□□□□ 0.83
SDCBP-209ENST00000522243 FEZ2Q9UHY8 353 aaPredicted RBP20.23■□□□□ 0.83
SDCBP-209ENST00000522243 IGHV5-51A0A0C4DH38 117 aa20.22■□□□□ 0.83
SDCBP-209ENST00000522243 CCDC78A2IDD5 438 aa20.22■□□□□ 0.83
SDCBP-209ENST00000522243 KIAA0754O94854 1291 aa20.22■□□□□ 0.83
SDCBP-209ENST00000522243 RALBP11234 206 aa20.22■□□□□ 0.83
SDCBP-209ENST00000522243 SEPT6Q14141 434 aa20.22■□□□□ 0.83
SDCBP-209ENST00000522243 GSE1Q14687 1217 aa20.22■□□□□ 0.83
SDCBP-209ENST00000522243 KCNAB1Q14722 419 aa20.22■□□□□ 0.83
SDCBP-209ENST00000522243 KLHL35Q6PF15 583 aa20.22■□□□□ 0.83
SDCBP-209ENST00000522243 BORAQ6PGQ7 559 aa20.22■□□□□ 0.83
SDCBP-209ENST00000522243 CERS6Q6ZMG9 384 aa20.22■□□□□ 0.83
SDCBP-209ENST00000522243 PRICKLE2Q7Z3G6 844 aa20.22■□□□□ 0.83
SDCBP-209ENST00000522243 TXLNBQ8N3L3 684 aa20.22■□□□□ 0.83
SDCBP-209ENST00000522243 ESX1Q8N693 406 aa20.22■□□□□ 0.83
SDCBP-209ENST00000522243 SLC35B2Q8TB61 432 aa20.22■□□□□ 0.83
SDCBP-209ENST00000522243 LINC00615Q96LM1 132 aaPredicted RBP20.22■□□□□ 0.83
SDCBP-209ENST00000522243 RMDN2Q96LZ7 410 aa20.22■□□□□ 0.83
SDCBP-209ENST00000522243 COPS8Q99627 209 aa20.22■□□□□ 0.83
SDCBP-209ENST00000522243 FAM117AQ9C073 453 aa20.22■□□□□ 0.83
SDCBP-209ENST00000522243 IMPACTQ9P2X3 320 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms