RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 CXADRP78310 365 aa17.51■□□□□ 0.39
TRAPPC9-211ENST00000521700 CACNG1Q06432 222 aa17.51■□□□□ 0.39
TRAPPC9-211ENST00000521700 TGIF1Q15583 401 aa17.51■□□□□ 0.39
TRAPPC9-211ENST00000521700 SKIDA1Q1XH10 827 aa17.51■□□□□ 0.39
TRAPPC9-211ENST00000521700 TMEM164Q5U3C3 297 aa17.51■□□□□ 0.39
TRAPPC9-211ENST00000521700 TAS2R42Q7RTR8 314 aa17.51■□□□□ 0.39
TRAPPC9-211ENST00000521700 ZFAND4Q86XD8 727 aa17.51■□□□□ 0.39
TRAPPC9-211ENST00000521700 PLXDC1Q8IUK5 500 aa17.51■□□□□ 0.39
TRAPPC9-211ENST00000521700 REXO1L1PQ8IX06 675 aa17.51■□□□□ 0.39
TRAPPC9-211ENST00000521700 CFAP206Q8IYR0 622 aa17.51■□□□□ 0.39
TRAPPC9-211ENST00000521700 PRELID2Q8N945 189 aa17.51■□□□□ 0.39
TRAPPC9-211ENST00000521700 GPR150Q8NGU9 434 aa17.51■□□□□ 0.39
TRAPPC9-211ENST00000521700 TAAR9Q96RI9 348 aa17.51■□□□□ 0.39
TRAPPC9-211ENST00000521700 INSM2Q96T92 566 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC9-211ENST00000521700 WWP1Q9H0M0 922 aa17.51■□□□□ 0.39
TRAPPC9-211ENST00000521700 CPNE5Q9HCH3 593 aa17.51■□□□□ 0.39
TRAPPC9-211ENST00000521700 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.51■□□□□ 0.39
TRAPPC9-211ENST00000521700 FAM8A1Q9UBU6 413 aa17.51■□□□□ 0.39
TRAPPC9-211ENST00000521700 ACSL5Q9ULC5 683 aa17.51■□□□□ 0.39
TRAPPC9-211ENST00000521700 JRKLQ9Y4A0 524 aa17.51■□□□□ 0.39
TRAPPC9-211ENST00000521700 PCDHGA3Q9Y5H0 932 aa17.51■□□□□ 0.39
TRAPPC9-211ENST00000521700 MN1Q10571 1320 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 AHCTF1Q8WYP5 2266 aa17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 CCDC162PA2VCL2 907 aa17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 EFCAB7A8K855 629 aa17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 B4E171 279 aa17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 CFAP99D6REC4 459 aa17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 GAS8O95995 478 aa17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 C9P02748 559 aa17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 MSNP26038 577 aaKnown RBP17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 TSPAN7P41732 249 aa17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 UCNP55089 124 aa17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 GFERP55789 205 aa17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 KCTD19Q17RG1 926 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 GSTA5Q7RTV2 222 aa17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 GPR155Q7Z3F1 870 aa17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 LILRA3Q8N6C8 439 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 BMPERQ8N8U9 685 aa17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 SPDYE1Q8NFV5 336 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 OR13J1Q8NGT2 312 aa17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 RSC1A1Q92681 617 aa17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 ART4Q93070 314 aa17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 RANBP9Q96S59 729 aa17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 SLC39A1Q9NY26 324 aa17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 SLC2A6Q9UGQ3 507 aa17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 CFAP20Q9Y6A4 193 aaKnown RBP17.5■□□□□ 0.39
TRAPPC9-211ENST00000521700 HEATR9A2RTY3 570 aa17.49■□□□□ 0.39
TRAPPC9-211ENST00000521700 OR51F1A6NGY5 319 aa17.49■□□□□ 0.39
TRAPPC9-211ENST00000521700 CAPN5O15484 640 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC9-211ENST00000521700 POLBP06746 335 aa17.49■□□□□ 0.39
TRAPPC9-211ENST00000521700 LIPCP11150 499 aa17.49■□□□□ 0.39
TRAPPC9-211ENST00000521700 MTHFD1P11586 935 aaKnown RBP17.49■□□□□ 0.39
TRAPPC9-211ENST00000521700 ADRA1DP25100 572 aa17.49■□□□□ 0.39
TRAPPC9-211ENST00000521700 LAMB3Q13751 1172 aa17.49■□□□□ 0.39
TRAPPC9-211ENST00000521700 DBN1Q16643 649 aa17.49■□□□□ 0.39
TRAPPC9-211ENST00000521700 TSTD2Q5T7W7 516 aa17.49■□□□□ 0.39
TRAPPC9-211ENST00000521700 C4orf22Q6V702 233 aa17.49■□□□□ 0.39
TRAPPC9-211ENST00000521700 FAM129CQ86XR2 697 aa17.49■□□□□ 0.39
TRAPPC9-211ENST00000521700 DTX1Q86Y01 620 aa17.49■□□□□ 0.39
TRAPPC9-211ENST00000521700 CLDN19Q8N6F1 224 aa17.49■□□□□ 0.39
TRAPPC9-211ENST00000521700 C9orf72Q96LT7 481 aa17.49■□□□□ 0.39
TRAPPC9-211ENST00000521700 ZNF778Q96MU6 729 aa17.49■□□□□ 0.39
TRAPPC9-211ENST00000521700 KCNF1Q9H3M0 494 aa17.49■□□□□ 0.39
TRAPPC9-211ENST00000521700 HOMER3Q9NSC5 361 aa17.49■□□□□ 0.39
TRAPPC9-211ENST00000521700 IMP3Q9NV31 184 aaKnown RBP17.49■□□□□ 0.39
TRAPPC9-211ENST00000521700 RIMKLBQ9ULI2 386 aa17.49■□□□□ 0.39
TRAPPC9-211ENST00000521700 B3GALT1Q9Y5Z6 326 aa17.49■□□□□ 0.39
TRAPPC9-211ENST00000521700 C17orf113A0A1B0GUU1 675 aa17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 EFSO43281 561 aa17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 ANKRD34CP0C6C1 535 aa17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 CD82P27701 267 aa17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 FOXN2P32314 431 aa17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 LEPRP48357 1165 aaKnown RBP17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 MC2RQ01718 297 aa17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 ZNF658BQ4V348 819 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 SOWAHCQ53LP3 525 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 ARHGAP40Q5TG30 622 aa17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 CAPRIN2Q6IMN6 1127 aaKnown RBP17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 DUS1LQ6P1R4 473 aaKnown RBP17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 RASGEF1CQ8N431 466 aa17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 HM13Q8TCT9 377 aa17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 JPH3Q8WXH2 748 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 HDAC10Q969S8 669 aa17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 MS4A14Q96JA4 679 aa17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 PBKQ96KB5 322 aa17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 RMDN2Q96LZ7 410 aa17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 C12orf66Q96MD2 445 aa17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 TGM7Q96PF1 710 aa17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 BBC3Q96PG8 261 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 CCM2Q9BSQ5 444 aa17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 DDA1Q9BW61 102 aa17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 EIF2B3Q9NR50 452 aaKnown RBP17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 WDR70Q9NW82 654 aa17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 SMARCAL1Q9NZC9 954 aa17.48■□□□□ 0.39
TRAPPC9-211ENST00000521700 IGSF10Q6WRI0 2623 aa17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 ZSCAN12O43309 604 aa17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 GOT2P00505 430 aaKnown RBP17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 SLC35G4P0C7Q5 338 aa17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 CAPZBP47756 277 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms