RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 RPA4Q13156 261 aa12.28□□□□□ -0.44
HDAC2-211ENST00000521233 HLTFQ14527 1009 aaKnown RBP eCLIP12.28□□□□□ -0.44
HDAC2-211ENST00000521233 SEMA3AQ14563 771 aa12.28□□□□□ -0.44
HDAC2-211ENST00000521233 SYTL3Q4VX76 610 aa12.28□□□□□ -0.44
HDAC2-211ENST00000521233 PTRHD1Q6GMV3 140 aaKnown RBP12.28□□□□□ -0.44
HDAC2-211ENST00000521233 KIAA0408Q6ZU52 694 aa12.28□□□□□ -0.44
HDAC2-211ENST00000521233 SLC9B2Q86UD5 537 aa12.28□□□□□ -0.44
HDAC2-211ENST00000521233 CCDC25Q86WR0 208 aa12.28□□□□□ -0.44
HDAC2-211ENST00000521233 C17orf82Q86X59 251 aaPredicted RBP12.28□□□□□ -0.44
HDAC2-211ENST00000521233 ANKMY2Q8IV38 441 aa12.28□□□□□ -0.44
HDAC2-211ENST00000521233 IFT20Q8IY31 132 aa12.28□□□□□ -0.44
HDAC2-211ENST00000521233 SFRP1Q8N474 314 aa12.28□□□□□ -0.44
HDAC2-211ENST00000521233 CLDN19Q8N6F1 224 aa12.28□□□□□ -0.44
HDAC2-211ENST00000521233 WDR48Q8TAF3 677 aa12.28□□□□□ -0.44
HDAC2-211ENST00000521233 GSDMBQ8TAX9 411 aa12.28□□□□□ -0.44
HDAC2-211ENST00000521233 LPGAT1Q92604 370 aa12.28□□□□□ -0.44
HDAC2-211ENST00000521233 PWWP2AQ96N64 755 aa12.28□□□□□ -0.44
HDAC2-211ENST00000521233 WDR83Q9BRX9 315 aaKnown RBP12.28□□□□□ -0.44
HDAC2-211ENST00000521233 CCDC68Q9H2F9 335 aa12.28□□□□□ -0.44
HDAC2-211ENST00000521233 ZDHHC18Q9NUE0 388 aa12.28□□□□□ -0.44
HDAC2-211ENST00000521233 TBC1D29Q9UFV1 150 aa12.28□□□□□ -0.44
HDAC2-211ENST00000521233 SLC23A2Q9UGH3 650 aa12.28□□□□□ -0.44
HDAC2-211ENST00000521233 DMGDHQ9UI17 866 aaKnown RBP12.28□□□□□ -0.44
HDAC2-211ENST00000521233 ST14Q9Y5Y6 855 aa12.28□□□□□ -0.44
HDAC2-211ENST00000521233 U3KQA8 63 aa12.28□□□□□ -0.44
HDAC2-211ENST00000521233 CPED1A4D0V7 1026 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 GOLGA8KD6RF30 607 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 GOLGA8TH3BQL2 631 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 GIPC1O14908 333 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 KPNA5O15131 536 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 OR1I1O60431 355 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 PNLIPP16233 465 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 GLB1P16278 677 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 SLC1A2P43004 574 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 FASLGP48023 281 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 EIF3BP55884 814 aaKnown RBP12.27□□□□□ -0.45
HDAC2-211ENST00000521233 E2F1Q01094 437 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 DNAJC3Q13217 504 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 FASTKD3Q14CZ7 662 aaKnown RBP12.27□□□□□ -0.45
HDAC2-211ENST00000521233 HSP90AA5PQ58FG0 334 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 METRNLQ641Q3 311 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 GUSBP11Q6P575 273 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 IYDQ6PHW0 289 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 ABRAXAS1Q6UWZ7 409 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 EFL1Q7Z2Z2 1120 aaKnown RBP12.27□□□□□ -0.45
HDAC2-211ENST00000521233 GALNT7Q86SF2 657 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 IGDCC3Q8IVU1 814 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 CNTN4Q8IWV2 1026 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 TRIM48Q8IWZ4 208 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 PALM2Q8IXS6 379 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 RBM12BQ8IXT5 1001 aaKnown RBP12.27□□□□□ -0.45
HDAC2-211ENST00000521233 NAGSQ8N159 534 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 IFI44Q8TCB0 444 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 SH3KBP1Q96B97 665 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 CCDC97Q96F63 343 aaPredicted RBP12.27□□□□□ -0.45
HDAC2-211ENST00000521233 FMO2Q99518 471 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 P2RY12Q9H244 342 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 COG4Q9H9E3 785 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 SARS2Q9NP81 518 aaKnown RBP12.27□□□□□ -0.45
HDAC2-211ENST00000521233 PPANQ9NQ55 473 aaKnown RBP12.27□□□□□ -0.45
HDAC2-211ENST00000521233 POT1Q9NUX5 634 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 NSMCE4AQ9NXX6 385 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 ZFATQ9P243 1243 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 FBXO5Q9UKT4 447 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 COMMD10Q9Y6G5 202 aa12.27□□□□□ -0.45
HDAC2-211ENST00000521233 ARHGEF17Q96PE2 2063 aaPredicted RBP12.26□□□□□ -0.45
HDAC2-211ENST00000521233 SPTBN2O15020 2390 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 RHPN2P1A8MT19 583 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 DKK1O94907 266 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 APOA4P06727 396 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 GPR3P46089 330 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 MAZP56270 477 aaKnown RBP12.26□□□□□ -0.45
HDAC2-211ENST00000521233 MGAT5Q09328 741 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 BOP1Q14137 746 aaKnown RBP12.26□□□□□ -0.45
HDAC2-211ENST00000521233 NFE2L1Q14494 772 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 SMAD1Q15797 465 aaKnown RBP12.26□□□□□ -0.45
HDAC2-211ENST00000521233 SEPT7Q16181 437 aaKnown RBP12.26□□□□□ -0.45
HDAC2-211ENST00000521233 HP1BP3Q5SSJ5 553 aaPredicted RBP12.26□□□□□ -0.45
HDAC2-211ENST00000521233 TEX35Q5T0J7 233 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 MICALCLQ6ZW33 695 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 ZNF438Q7Z4V0 828 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 LDB1Q86U70 411 aaPredicted RBP12.26□□□□□ -0.45
HDAC2-211ENST00000521233 ARL14Q8N4G2 192 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 C2CD4AQ8NCU7 369 aaPredicted RBP12.26□□□□□ -0.45
HDAC2-211ENST00000521233 SLC37A2Q8TED4 501 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 IFT81Q8WYA0 676 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 ELMO1Q92556 727 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 CDKL2Q92772 493 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 CCDC74AQ96AQ1 378 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 TMEM159Q96B96 161 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 CXorf40BQ96DE9 158 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.26□□□□□ -0.45
HDAC2-211ENST00000521233 PRDM8Q9NQV8 689 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 IARS2Q9NSE4 1012 aaKnown RBP12.26□□□□□ -0.45
HDAC2-211ENST00000521233 TOR4AQ9NXH8 423 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 IL1RAPL1Q9NZN1 696 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 FAM8A1Q9UBU6 413 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 CORO1CQ9ULV4 474 aaPredicted RBP12.26□□□□□ -0.45
HDAC2-211ENST00000521233 HEBP2Q9Y5Z4 205 aa12.26□□□□□ -0.45
HDAC2-211ENST00000521233 PRSS21Q9Y6M0 314 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms