RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 CD274Q9NZQ7 290 aa8.34□□□□□ -1.07
CTNNA1-210ENST00000518825 CDH7Q9ULB5 785 aa8.34□□□□□ -1.07
CTNNA1-210ENST00000518825 PCDHB3Q9Y5E6 796 aa8.34□□□□□ -1.07
CTNNA1-210ENST00000518825 PRSS21Q9Y6M0 314 aa8.34□□□□□ -1.07
CTNNA1-210ENST00000518825 TET1Q8NFU7 2136 aa8.34□□□□□ -1.08
CTNNA1-210ENST00000518825 H7C0S8 307 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 FZD6O60353 706 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 VPS26AO75436 327 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 KATNA1O75449 491 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 PCNAP12004 261 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 PRKAR2AP13861 404 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 RPL17P18621 184 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 RANBP1P43487 201 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 DCTN2Q13561 401 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 CBX2Q14781 532 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 PTGR1Q14914 329 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 ZIK1Q3SY52 487 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 FGD3Q5JSP0 725 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 CYP20A1Q6UW02 462 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 TBC1D21Q8IYX1 336 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 VPS50Q96JG6 964 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.33□□□□□ -1.084e-11■■□□□ 12
CTNNA1-210ENST00000518825 CCDC68Q9H2F9 335 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 CD320Q9NPF0 282 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 IRAK4Q9NWZ3 460 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 SLC25A37Q9NYZ2 338 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 IL17CQ9P0M4 197 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 THEGQ9P2T0 379 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 TRMT6Q9UJA5 497 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 ARIH1Q9Y4X5 557 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 ZNF840PA6NDX5 716 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 AREL1O15033 823 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 DFNA5O60443 496 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 STC2O76061 302 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 ALPLP05186 524 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 ALPIP09923 528 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 MATN1P21941 496 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 DCKP27707 260 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 GDF5P43026 501 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 TTPAP49638 278 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 ACLYP53396 1101 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 ADARP55265 1226 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 ILF2Q12905 390 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 PCBP2Q15366 365 aaKnown RBP eCLIP8.33□□□□□ -1.082e-7■■■■■ 56.4
CTNNA1-210ENST00000518825 CRY1Q16526 586 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 ATP6AP1LQ52LC2 224 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 OTUD3Q5T2D3 398 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 XAF1Q6GPH4 301 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 LAIR2Q6ISS4 152 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 NCEH1Q6PIU2 408 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 IL27RAQ6UWB1 636 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 ENPP6Q6UWR7 440 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 TMEM26Q6ZUK4 368 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 HS3ST5Q8IZT8 346 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 CRIPAKQ8N1N5 446 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 LRRC43Q8N309 656 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 DHRSXQ8N5I4 330 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 VOPP1Q96AW1 172 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 MUC13Q9H3R2 512 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 NSUN3Q9H649 340 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 LHX3Q9UBR4 397 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 DNMT3LQ9UJW3 386 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 CDH23Q9H251 3354 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 A0A1W2PPW3 197 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 ILVBLA1L0T0 632 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 ARNTLO00327 626 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 AXIN1O15169 862 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 LDLRP01130 860 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 UMPSP11172 480 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 HMGA1P17096 107 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 MZF1P28698 734 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 ATP5C1P36542 298 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 PIK3CGP48736 1102 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 ZXDBP98169 803 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 PRKG2Q13237 762 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 GPR107Q5VW38 600 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 FUT10Q6P4F1 479 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 ABRAXAS1Q6UWZ7 409 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 KCTD8Q6ZWB6 473 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 TNIP2Q8NFZ5 429 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 METTL6Q8TCB7 284 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 TMBIM1Q969X1 311 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 CGREF1Q99674 301 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 HIPK3Q9H422 1215 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 LMCD1Q9NZU5 365 aa8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 POLR3HQ9Y535 204 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-210ENST00000518825 K7ERQ8 282 aa8.32□□□□□ -1.08
CTNNA1-210ENST00000518825 NBNO60934 754 aa8.32□□□□□ -1.08
CTNNA1-210ENST00000518825 C1QCP02747 245 aa8.32□□□□□ -1.08
CTNNA1-210ENST00000518825 INHBBP09529 407 aa8.32□□□□□ -1.08
CTNNA1-210ENST00000518825 GGT1P19440 569 aa8.32□□□□□ -1.08
CTNNA1-210ENST00000518825 CORO1AP31146 461 aaKnown RBP8.32□□□□□ -1.08
CTNNA1-210ENST00000518825 GGT5P36269 586 aa8.32□□□□□ -1.08
CTNNA1-210ENST00000518825 ARSFP54793 590 aa8.32□□□□□ -1.08
CTNNA1-210ENST00000518825 GTF2H2Q13888 395 aa8.32□□□□□ -1.08
CTNNA1-210ENST00000518825 PHKG1Q16816 387 aa8.32□□□□□ -1.08
CTNNA1-210ENST00000518825 ZXDCQ2QGD7 858 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-210ENST00000518825 AARS2Q5JTZ9 985 aaKnown RBP8.32□□□□□ -1.08
CTNNA1-210ENST00000518825 ATXN7L2Q5T6C5 722 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-210ENST00000518825 RNF219Q5W0B1 726 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms