RNA–Protein interactions for RNA: ENST00000518668.5

DENND3-208, Transcript of DENN domain containing 3, human

TSL 5

Gene DENND3, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND3-208	ENST00000518668	CIB1	Q99828	191 aa		13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	C12orf65	Q9H3J6	166 aa	Known RBP	13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	FADS2P1	A8MWK0	482 aa		13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	RGS10	O43665	173 aa		13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	HLA-DQB2	P05538	268 aa		13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	SPATA31D3	P0C874	917 aa		13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	CBSL	P0DN79	551 aa		13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	GNAZ	P19086	355 aa		13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	PRKCH	P24723	683 aa		13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	CBS	P35520	551 aa		13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	DGKG	P49619	791 aa		13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	MLLT6	P55198	1093 aa	Predicted RBP	13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	ACTR3	P61158	418 aa		13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	FOXM1	Q08050	763 aa		13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	CARD16	Q5EG05	197 aa		13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	ATAT1	Q5SQI0	421 aa		13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	SPATA31D4	Q6ZUB0	917 aa		13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	SIDT2	Q8NBJ9	832 aa	Known RBP	13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	SLC13A3	Q8WWT9	602 aa		13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	MINDY3	Q9H8M7	445 aa		13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	USP29	Q9HBJ7	922 aa		13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	PDP1	Q9P0J1	537 aa	Predicted RBP	13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	ZNF282	Q9UDV7	671 aa	Predicted RBP	13.96	□□□□□ -0.17
DENND3-208	ENST00000518668	ARVCF	O00192	962 aa		13.96	□□□□□ -0.18
DENND3-208	ENST00000518668	PAPSS2	O95340	614 aa	Predicted RBP	13.96	□□□□□ -0.18
DENND3-208	ENST00000518668	CTSK	P43235	329 aa		13.96	□□□□□ -0.18
DENND3-208	ENST00000518668	ZNF132	P52740	706 aa		13.96	□□□□□ -0.18
DENND3-208	ENST00000518668	MAPK10	P53779	464 aa		13.96	□□□□□ -0.18
DENND3-208	ENST00000518668	RPS14	P62263	151 aa	Known RBP	13.96	□□□□□ -0.18
DENND3-208	ENST00000518668	BEND5	Q7L4P6	421 aa		13.96	□□□□□ -0.18
DENND3-208	ENST00000518668	TMC8	Q8IU68	726 aa		13.96	□□□□□ -0.18
DENND3-208	ENST00000518668	KREMEN2	Q8NCW0	462 aa		13.96	□□□□□ -0.18
DENND3-208	ENST00000518668	PIH1D2	Q8WWB5	315 aa		13.96	□□□□□ -0.18
DENND3-208	ENST00000518668	AZIN2	Q96A70	460 aa		13.96	□□□□□ -0.18
DENND3-208	ENST00000518668	NPY6R	Q99463	290 aa		13.96	□□□□□ -0.18
DENND3-208	ENST00000518668	THUMPD1	Q9NXG2	353 aa	Known RBP	13.96	□□□□□ -0.18
DENND3-208	ENST00000518668	EIF2B4	Q9UI10	523 aa	Known RBP	13.96	□□□□□ -0.18
DENND3-208	ENST00000518668	POMP	Q9Y244	141 aa		13.96	□□□□□ -0.18
DENND3-208	ENST00000518668	CHURC1-FNTB	B4DL54	471 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	GTPBP1	O00178	669 aa	Known RBP	13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	NRP1	O14786	923 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	NOV	P48745	357 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	PRKCZ	Q05513	592 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	SF1	Q15637	639 aa	Known RBP	13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	COMMD2	Q86X83	199 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	LIX1	Q8N485	282 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	TNKS2	Q9H2K2	1166 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	TAS2R1	Q9NYW7	299 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	CCDC162P	A2VCL2	907 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	TNFRSF11B	O00300	401 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	HLA-DQA2	P01906	255 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	LYN	P07948	512 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	PSMD8	P48556	350 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	ADGRE1	Q14246	886 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	SCAI	Q8N9R8	606 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	CLHC1	Q8NHS4	586 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	SCAMP5	Q8TAC9	235 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	OVCA2	Q8WZ82	227 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	MAGEB17	A8MXT2	336 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	C8A	P07357	584 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	BLMH	Q13867	455 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	DENND5A	Q6IQ26	1287 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	PACRGL	Q8N7B6	248 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	SPACA7	Q96KW9	195 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	ZNF347	Q96SE7	839 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	MIPEP	Q99797	713 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	C1orf21	Q9H246	121 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	RPRD1B	Q9NQG5	326 aa	Known RBP	13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	TRMT13	Q9NUP7	481 aa	Known RBP	13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	ZDHHC3	Q9NYG2	299 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668		A8MUI8	341 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	SETD1A	O15047	1707 aa	Known RBP	13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	EPHX1	P07099	455 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	DBT	P11182	482 aa	Known RBP	13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	MAPK12	P53778	367 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	AP1S2	P56377	157 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	STXBP1	P61764	594 aa	Known RBP	13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	PTGES3	Q15185	160 aa	Known RBP	13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	ZNF697	Q5TEC3	545 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	TMC5	Q6UXY8	1006 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	CIR1	Q86X95	450 aa	Predicted RBP	13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	PLEKHO2	Q8TD55	490 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	GPR22	Q99680	433 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	MCMBP	Q9BTE3	642 aa		13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	NOL6	Q9H6R4	1146 aa	Known RBP	13.95	□□□□□ -0.18
DENND3-208	ENST00000518668	LIN52	Q52LA3	116 aa		13.94	□□□□□ -0.18
DENND3-208	ENST00000518668	PAOX	Q6QHF9	649 aa		13.94	□□□□□ -0.18
DENND3-208	ENST00000518668	TMPRSS11A	Q6ZMR5	421 aa		13.94	□□□□□ -0.18
DENND3-208	ENST00000518668	ZZZ3	Q8IYH5	903 aa		13.94	□□□□□ -0.18
DENND3-208	ENST00000518668	SLC43A3	Q8NBI5	491 aa		13.94	□□□□□ -0.18
DENND3-208	ENST00000518668	TTL	Q8NG68	377 aa		13.94	□□□□□ -0.18
DENND3-208	ENST00000518668	HAT1	O14929	419 aa		13.94	□□□□□ -0.18
DENND3-208	ENST00000518668	RAP2A	P10114	183 aa		13.94	□□□□□ -0.18
DENND3-208	ENST00000518668	RCVRN	P35243	200 aa		13.94	□□□□□ -0.18
DENND3-208	ENST00000518668	LRRC70	Q7Z2Q7	622 aa		13.94	□□□□□ -0.18
DENND3-208	ENST00000518668	SLC29A3	Q9BZD2	475 aa		13.94	□□□□□ -0.18
DENND3-208	ENST00000518668	TMEM27	Q9HBJ8	222 aa		13.94	□□□□□ -0.18
DENND3-208	ENST00000518668	CD320	Q9NPF0	282 aa		13.94	□□□□□ -0.18
DENND3-208	ENST00000518668	ITM2C	Q9NQX7	267 aa		13.94	□□□□□ -0.18
DENND3-208	ENST00000518668	ZIM2	Q9NZV7	527 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms