RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, human

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSPAN17-208	ENST00000514705	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	ELOVL6	Q9H5J4	265 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	CRLS1	Q9UJA2	301 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	SLC27A5	Q9Y2P5	690 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	FAM234B	A2RU67	622 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	SEPT4	O43236	478 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	PKM	P14618	531 aa	Known RBP	13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	CD1D	P15813	335 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	PRDX3	P30048	256 aa	Known RBP	13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	MC4R	P32245	332 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	HSPA7	P48741	367 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	SULT1C3	Q6IMI6	304 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	TMEM53	Q6P2H8	277 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	RANBP10	Q6VN20	620 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	LRRC49	Q8IUZ0	686 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	TMEM40	Q8WWA1	233 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	TRUB1	Q8WWH5	349 aa	Known RBP	13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	RSPH1	Q8WYR4	309 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	MS4A4A	Q96JQ5	239 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	MAEL	Q96JY0	434 aa	Known RBP	13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	MIR1-1HG	Q9H1L0	117 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	OPTC	Q9UBM4	332 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	SAMHD1	Q9Y3Z3	626 aa	Known RBP	13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	SMIM35	A0A1B0GVV1	85 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	FUCA1	P04066	466 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	FYN	P06241	537 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	HLA-DPA1	P20036	260 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	HMGCS1	Q01581	520 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	FAM117B	Q6P1L5	589 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	MAMDC4	Q6UXC1	1216 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	ITIH5	Q86UX2	942 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	CNIH3	Q8TBE1	160 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	SPPL2A	Q8TCT8	520 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	ACD	Q96AP0	544 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	RMND5A	Q9H871	391 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	IPPK	Q9H8X2	491 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	ATP13A1	Q9HD20	1204 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	TRPV2	Q9Y5S1	764 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	HS3ST4	Q9Y661	456 aa		13.72	□□□□□ -0.21
TSPAN17-208	ENST00000514705	DOCK5	Q9H7D0	1870 aa		13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	DIRAS1	O95057	198 aa		13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	NTRK1	P04629	796 aa		13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	HAPLN1	P10915	354 aa	Predicted RBP	13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	IGFBP6	P24592	240 aa	Predicted RBP	13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	ATP4B	P51164	291 aa		13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	PLA2G16	P53816	162 aa		13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	SCAP	Q12770	1279 aa		13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	C6orf141	Q5SZD1	244 aa		13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	CYP20A1	Q6UW02	462 aa		13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	PAQR9	Q6ZVX9	377 aa		13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	SLC22A16	Q86VW1	577 aa		13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	STX19	Q8N4C7	294 aa		13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	TFB2M	Q9H5Q4	396 aa	Known RBP	13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	DNAJB9	Q9UBS3	223 aa		13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	PCDHGC4	Q9Y5F7	938 aa		13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	CXCR6	O00574	342 aa		13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	INMT	O95050	263 aa		13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	ZCCHC8	Q6NZY4	707 aa	Known RBP	13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	ALDH16A1	Q8IZ83	802 aa		13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	TMEM125	Q96AQ2	219 aa		13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	VPS51	Q9UID3	782 aa		13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	ITGB1BP2	Q9UKP3	347 aa		13.71	□□□□□ -0.21
TSPAN17-208	ENST00000514705	hCG_2039718	K7EN88	272 aa		13.71	□□□□□ -0.22
TSPAN17-208	ENST00000514705	ALOX5	P09917	674 aa		13.71	□□□□□ -0.22
TSPAN17-208	ENST00000514705	PIM1	P11309	404 aa	Predicted RBP	13.71	□□□□□ -0.22
TSPAN17-208	ENST00000514705	CRYBB1	P53674	252 aa	Predicted RBP	13.71	□□□□□ -0.22
TSPAN17-208	ENST00000514705	NPTX1	Q15818	432 aa		13.71	□□□□□ -0.22
TSPAN17-208	ENST00000514705	PRR23B	Q6ZRT6	265 aa		13.71	□□□□□ -0.22
TSPAN17-208	ENST00000514705	EPHX4	Q8IUS5	362 aa		13.71	□□□□□ -0.22
TSPAN17-208	ENST00000514705	TMEM199	Q8N511	208 aa		13.71	□□□□□ -0.22
TSPAN17-208	ENST00000514705	REXO5	Q96IC2	774 aa	Known RBP	13.71	□□□□□ -0.22
TSPAN17-208	ENST00000514705	HEPH	Q9BQS7	1158 aa		13.71	□□□□□ -0.22
TSPAN17-208	ENST00000514705	PAAF1	Q9BRP4	392 aa		13.71	□□□□□ -0.22
TSPAN17-208	ENST00000514705	ITM2C	Q9NQX7	267 aa		13.71	□□□□□ -0.22
TSPAN17-208	ENST00000514705	GMIP	Q9P107	970 aa		13.71	□□□□□ -0.22
TSPAN17-208	ENST00000514705	SERPINA1	P01009	418 aa		13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	MYCLP1	P12525	358 aa	Predicted RBP	13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	HIST1H2AD	P20671	130 aa		13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	AGXT	P21549	392 aa		13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	CYBRD1	Q53TN4	286 aa		13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	RBM48	Q5RL73	367 aa	Known RBP	13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	C6orf136	Q5SQH8	315 aa		13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	AFTPH	Q6ULP2	937 aa		13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	CCDC80	Q76M96	950 aa		13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	PHACTR4	Q8IZ21	702 aa		13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	STON2	Q8WXE9	905 aa		13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	CDKN2AIPNL	Q96HQ2	116 aa		13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	ITCH	Q96J02	903 aa		13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	HIST1H2AH	Q96KK5	128 aa		13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	PPP3R2	Q96LZ3	170 aa		13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	NSMCE3	Q96MG7	304 aa		13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	DEFB118	Q96PH6	123 aa		13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	IL12RB2	Q99665	862 aa		13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	HIST1H2AJ	Q99878	128 aa		13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	H2AFJ	Q9BTM1	129 aa		13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	AASS	Q9UDR5	926 aa		13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	LOC100130705	A0A1B0GUX0	176 aa		13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	IQCF5	A8MTL0	148 aa		13.7	□□□□□ -0.22
TSPAN17-208	ENST00000514705	GABRD	O14764	452 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms