RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 VWA5B1Q5TIE3 1220 aa19.82■□□□□ 0.76
SQSTM1-215ENST00000514093 HGSNATQ68CP4 663 aa19.82■□□□□ 0.76
SQSTM1-215ENST00000514093 DUS1LQ6P1R4 473 aaKnown RBP19.82■□□□□ 0.76
SQSTM1-215ENST00000514093 AMZ2Q86W34 360 aa19.82■□□□□ 0.76
SQSTM1-215ENST00000514093 FAM71BQ8TC56 605 aa19.82■□□□□ 0.76
SQSTM1-215ENST00000514093 CPT1BQ92523 772 aa19.82■□□□□ 0.76
SQSTM1-215ENST00000514093 INPP5DQ92835 1189 aa19.82■□□□□ 0.76
SQSTM1-215ENST00000514093 FATE1Q969F0 183 aa19.82■□□□□ 0.76
SQSTM1-215ENST00000514093 TRIM11Q96F44 468 aa19.82■□□□□ 0.76
SQSTM1-215ENST00000514093 LRFN5Q96NI6 719 aa19.82■□□□□ 0.76
SQSTM1-215ENST00000514093 CEP41Q9BYV8 373 aa19.82■□□□□ 0.76
SQSTM1-215ENST00000514093 ILKAPQ9H0C8 392 aaPredicted RBP19.82■□□□□ 0.76
SQSTM1-215ENST00000514093 MAGEE1Q9HCI5 957 aa19.82■□□□□ 0.76
SQSTM1-215ENST00000514093 RAD18Q9NS91 495 aa19.82■□□□□ 0.76
SQSTM1-215ENST00000514093 PCMTD2Q9NV79 361 aa19.82■□□□□ 0.76
SQSTM1-215ENST00000514093 C5AR2Q9P296 337 aa19.82■□□□□ 0.76
SQSTM1-215ENST00000514093 NFKBIL1Q9UBC1 381 aaPredicted RBP19.82■□□□□ 0.76
SQSTM1-215ENST00000514093 KRT38O76015 456 aa19.81■□□□□ 0.76
SQSTM1-215ENST00000514093 OTX2P32243 289 aa19.81■□□□□ 0.76
SQSTM1-215ENST00000514093 RORAP35398 523 aa19.81■□□□□ 0.76
SQSTM1-215ENST00000514093 GLRBP48167 497 aa19.81■□□□□ 0.76
SQSTM1-215ENST00000514093 KPNA2P52292 529 aaKnown RBP19.81■□□□□ 0.76
SQSTM1-215ENST00000514093 RIPPLY3P57055 190 aa19.81■□□□□ 0.76
SQSTM1-215ENST00000514093 NFE2L1Q14494 772 aa19.81■□□□□ 0.76
SQSTM1-215ENST00000514093 CCDC183Q5T5S1 534 aa19.81■□□□□ 0.76
SQSTM1-215ENST00000514093 FAM198BQ6UWH4 519 aa19.81■□□□□ 0.76
SQSTM1-215ENST00000514093 CPNE8Q86YQ8 564 aa19.81■□□□□ 0.76
SQSTM1-215ENST00000514093 SYTL1Q8IYJ3 562 aa19.81■□□□□ 0.76
SQSTM1-215ENST00000514093 SLC34A3Q8N130 599 aa19.81■□□□□ 0.76
SQSTM1-215ENST00000514093 OR8K5Q8NH50 307 aa19.81■□□□□ 0.76
SQSTM1-215ENST00000514093 TTC25Q96NG3 672 aa19.81■□□□□ 0.76
SQSTM1-215ENST00000514093 UNKQ9C0B0 810 aaKnown RBP19.81■□□□□ 0.76
SQSTM1-215ENST00000514093 MYO6Q9UM54 1294 aa19.81■□□□□ 0.76
SQSTM1-215ENST00000514093 SPTBP11277 2137 aa19.81■□□□□ 0.76
SQSTM1-215ENST00000514093 SLC9B1P1A6NJY1 282 aa19.8■□□□□ 0.76
SQSTM1-215ENST00000514093 MASP2O00187 686 aa19.8■□□□□ 0.76
SQSTM1-215ENST00000514093 HNRNPRO43390 633 aaKnown RBP19.8■□□□□ 0.76
SQSTM1-215ENST00000514093 ATXN8OSP0DMR3 200 aa19.8■□□□□ 0.76
SQSTM1-215ENST00000514093 PBLDP30039 288 aaPredicted RBP19.8■□□□□ 0.76
SQSTM1-215ENST00000514093 CTSCP53634 463 aa19.8■□□□□ 0.76
SQSTM1-215ENST00000514093 KLHL30Q0D2K2 578 aa19.8■□□□□ 0.76
SQSTM1-215ENST00000514093 CRB2Q5IJ48 1285 aa19.8■□□□□ 0.76
SQSTM1-215ENST00000514093 ARMC6Q6NXE6 501 aa19.8■□□□□ 0.76
SQSTM1-215ENST00000514093 OOSP2Q86WS3 158 aa19.8■□□□□ 0.76
SQSTM1-215ENST00000514093 NIPA2Q8N8Q9 360 aa19.8■□□□□ 0.76
SQSTM1-215ENST00000514093 RASGEF1AQ8N9B8 481 aa19.8■□□□□ 0.76
SQSTM1-215ENST00000514093 KCTD6Q8NC69 237 aa19.8■□□□□ 0.76
SQSTM1-215ENST00000514093 OR1L3Q8NH93 324 aa19.8■□□□□ 0.76
SQSTM1-215ENST00000514093 VPS35Q96QK1 796 aa19.8■□□□□ 0.76
SQSTM1-215ENST00000514093 ISCUQ9H1K1 167 aa19.8■□□□□ 0.76
SQSTM1-215ENST00000514093 ACTR5Q9H9F9 607 aaPredicted RBP19.8■□□□□ 0.76
SQSTM1-215ENST00000514093 LATS2Q9NRM7 1088 aa19.8■□□□□ 0.76
SQSTM1-215ENST00000514093 IP6K2Q9UHH9 426 aa19.8■□□□□ 0.76
SQSTM1-215ENST00000514093 ANAPC7Q9UJX3 599 aa19.8■□□□□ 0.76
SQSTM1-215ENST00000514093 SPO11Q9Y5K1 396 aa19.8■□□□□ 0.76
SQSTM1-215ENST00000514093 PIKFYVEQ9Y2I7 2098 aa19.8■□□□□ 0.76
SQSTM1-215ENST00000514093 LRRTM2O43300 516 aa19.79■□□□□ 0.76
SQSTM1-215ENST00000514093 MTHFD1P11586 935 aaKnown RBP19.79■□□□□ 0.76
SQSTM1-215ENST00000514093 XRCC4Q13426 336 aa19.79■□□□□ 0.76
SQSTM1-215ENST00000514093 LYPLAL1Q5VWZ2 237 aa19.79■□□□□ 0.76
SQSTM1-215ENST00000514093 TMEM220Q6QAJ8 160 aa19.79■□□□□ 0.76
SQSTM1-215ENST00000514093 PQLC3Q8N755 202 aa19.79■□□□□ 0.76
SQSTM1-215ENST00000514093 MOCOSQ96EN8 888 aa19.79■□□□□ 0.76
SQSTM1-215ENST00000514093 INSM2Q96T92 566 aaPredicted RBP19.79■□□□□ 0.76
SQSTM1-215ENST00000514093 THAP2Q9H0W7 228 aa19.79■□□□□ 0.76
SQSTM1-215ENST00000514093 HSD3B7Q9H2F3 369 aa19.79■□□□□ 0.76
SQSTM1-215ENST00000514093 ZBTB20Q9HC78 741 aaPredicted RBP19.79■□□□□ 0.76
SQSTM1-215ENST00000514093 BTRCQ9Y297 605 aa19.79■□□□□ 0.76
SQSTM1-215ENST00000514093 OR2AG2A6NM03 316 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 TMEM150CB9EJG8 249 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 GPR39O43194 453 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 UGT1A9O60656 530 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 UGT1A6P19224 532 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 POLR2CP19387 275 aaPredicted RBP19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 MX2P20592 715 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 UGT1A1P22309 533 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 UGT1A4P22310 534 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 GRNP28799 593 aaKnown RBP19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 MYL5Q02045 173 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 DMPKQ09013 629 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 NAA30Q147X3 362 aaPredicted RBP19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 NCF4Q15080 339 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 LLGL1Q15334 1064 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 ZNF789Q5FWF6 425 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 SP5Q6BEB4 398 aaPredicted RBP19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 CUZD1Q86UP6 607 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 RAB43Q86YS6 212 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 UBE2Q2Q8WVN8 375 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 HDAC11Q96DB2 347 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 WWP1Q9H0M0 922 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 UGT1A7Q9HAW7 530 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 UGT1A10Q9HAW8 530 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 UGT1A8Q9HAW9 530 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 FANCEQ9HB96 536 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 AIPL1Q9NZN9 384 aa19.78■□□□□ 0.76
SQSTM1-215ENST00000514093 APCP25054 2843 aa19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 POLQO75417 2590 aa19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 LDB2O43679 373 aa19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 KCNJ13O60928 360 aa19.77■□□□□ 0.76
SQSTM1-215ENST00000514093 CYP2A7P20853 494 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms