RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 GJA1P17302 382 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 CSNK2A2P19784 350 aaPredicted RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 LRPAP1P30533 357 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 ARFIP1P53367 373 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 MRPL49Q13405 166 aaKnown RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 RAB33AQ14088 237 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 PRKD1Q15139 912 aaPredicted RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 RCN1Q15293 331 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 GCNT6Q5T4J0 391 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 LCN1P1Q5VSP4 162 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 AP1ARQ63HQ0 302 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 KIAA1161Q6NSJ0 714 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 C2orf73Q8N5S3 287 aaPredicted RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 CCDC54Q8NEL0 328 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 ATP6V1C2Q8NEY4 427 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 OR52K2Q8NGK3 314 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 HM13Q8TCT9 377 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 ADAMTS18Q8TE60 1221 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 RHBDD1Q8TEB9 315 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 ZNF483Q8TF39 744 aaPredicted RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 ATXN2LQ8WWM7 1075 aaKnown RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 SMPDL3BQ92485 455 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 EFHD2Q96C19 240 aaPredicted RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 PTCD3Q96EY7 689 aaKnown RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 RIOK2Q9BVS4 552 aaKnown RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 DPEP3Q9H4B8 488 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 PIF1Q9H611 641 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 IL1RAPQ9NPH3 570 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 GDE1Q9NZC3 331 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 CKLFQ9UBR5 152 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 SEC14L3Q9UDX4 400 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 DUOX1Q9NRD9 1551 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 NPEPPSL1A6NEC2 478 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 A8MU76 341 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 GRID2O43424 1007 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 FOXD2O60548 495 aaPredicted RBP4.19□□□□□ -1.74
VCAN-209ENST00000513016 POP7O75817 140 aaKnown RBP4.19□□□□□ -1.74
VCAN-209ENST00000513016 SERPINA3P01011 423 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 ANXA4P09525 319 aaPredicted RBP4.19□□□□□ -1.74
VCAN-209ENST00000513016 C5AR1P21730 350 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 MYL9P24844 172 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 CBX5P45973 191 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 RPS3AP61247 264 aaKnown RBP4.19□□□□□ -1.74
VCAN-209ENST00000513016 CHIT1Q13231 466 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 RFX4Q33E94 735 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 ARSHQ5FYA8 562 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 ARMC3Q5W041 872 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 SLC30A9Q6PML9 568 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 GPR141Q7Z602 305 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 ZNF784Q8NCA9 323 aaPredicted RBP4.19□□□□□ -1.74
VCAN-209ENST00000513016 LNX1Q8TBB1 728 aaPredicted RBP4.19□□□□□ -1.74
VCAN-209ENST00000513016 CYB5D2Q8WUJ1 264 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 KCNJ9Q92806 393 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 SLC38A4Q969I6 547 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 PSMG2Q969U7 264 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 PMEPA1Q969W9 287 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 RGMAQ96B86 450 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 CMTM7Q96FZ5 175 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 FCRL5Q96RD9 977 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 GPR174Q9BXC1 333 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 TIGARQ9NQ88 270 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 GLS2Q9UI32 602 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 RARRES3Q9UL19 164 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 DNMT3AQ9Y6K1 912 aaPredicted RBP4.19□□□□□ -1.74
VCAN-209ENST00000513016 FFAR2O15552 330 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 RNGTTO60942 597 aaKnown RBP4.19□□□□□ -1.74
VCAN-209ENST00000513016 LYPLA1O75608 230 aaPredicted RBP4.19□□□□□ -1.74
VCAN-209ENST00000513016 UGT2B17O75795 530 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 KAT7O95251 611 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 GSRP00390 522 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 CYBAP13498 195 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 PEX19P40855 299 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 KIR3DL1P43629 444 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 RABIFP47224 123 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 PGDP52209 483 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 DRG2P55039 364 aaKnown RBP4.19□□□□□ -1.74
VCAN-209ENST00000513016 RGS8P57771 180 aaPredicted RBP4.19□□□□□ -1.74
VCAN-209ENST00000513016 MC1RQ01726 317 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 RHAGQ02094 409 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 ACY1Q03154 408 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 PTP4A2Q12974 167 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 CTBP1Q13363 440 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 PITRM1Q5JRX3 1037 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 LYSMD4Q5XG99 296 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 NUDT13Q86X67 352 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 OFCC1Q8IZS5 231 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 CADM2Q8N3J6 435 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 XAGE5Q8WWM1 108 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 HIC2Q96JB3 615 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 SLC35G5Q96KT7 338 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 GPR21Q99679 349 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 HDHD2Q9H0R4 259 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 ARHGEF3Q9NR81 526 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 PNMA8CA0A1B0GUJ8 204 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 EFCAB10A6NFE3 127 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 PMM2O15305 246 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 HDAC3O15379 428 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 MFSD11O43934 449 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 OR10H3O60404 316 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 TRIM3O75382 744 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms