RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, human

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HTT-210	ENST00000512909	SNHG28	P0DPA3	235 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	HNRNPH1	P31943	449 aa	Known RBP	4.21	□□□□□ -1.74
HTT-210	ENST00000512909	HOXD13	P35453	343 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	EIF2D	P41214	584 aa	Known RBP	4.21	□□□□□ -1.74
HTT-210	ENST00000512909	CDKN2A	P42771	156 aa	Known RBP	4.21	□□□□□ -1.74
HTT-210	ENST00000512909	MRPS34	P82930	218 aa	Known RBP	4.21	□□□□□ -1.74
HTT-210	ENST00000512909	SREBF2	Q12772	1141 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	GRSF1	Q12849	480 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
HTT-210	ENST00000512909	TRAF1	Q13077	416 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	DUSP28	Q4G0W2	176 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.21	□□□□□ -1.74
HTT-210	ENST00000512909	PLEKHS1	Q5SXH7	462 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	GPR139	Q6DWJ6	353 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	FAM122C	Q6P4D5	195 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	CRELD2	Q6UXH1	353 aa	Predicted RBP	4.21	□□□□□ -1.74
HTT-210	ENST00000512909	B3GNT6	Q6ZMB0	384 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	SEPT14	Q6ZU15	432 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	TECPR1	Q7Z6L1	1165 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	AACS	Q86V21	672 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	GPR180	Q86V85	440 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	MAGEC3	Q8TD91	643 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	CREB3L4	Q8TEY5	395 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	NSUN4	Q96CB9	384 aa	Known RBP	4.21	□□□□□ -1.74
HTT-210	ENST00000512909	ORAI1	Q96D31	301 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	ELMOD3	Q96FG2	381 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	URB1-AS1	Q96HZ7	61 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	THOC3	Q96J01	351 aa	Known RBP	4.21	□□□□□ -1.74
HTT-210	ENST00000512909	TMEM204	Q9BSN7	226 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	IL1RAPL2	Q9NP60	686 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	ARHGEF38	Q9NXL2	777 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	COPG2	Q9UBF2	871 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	WNT16	Q9UBV4	365 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	STK39	Q9UEW8	545 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	DDX19B	Q9UMR2	479 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	PCDHGB4	Q9UN71	923 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	PPIE	Q9UNP9	301 aa	Known RBP	4.21	□□□□□ -1.74
HTT-210	ENST00000512909	EXOC6B	Q9Y2D4	811 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	LOXL2	Q9Y4K0	774 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	SNX8	Q9Y5X2	465 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	ARFGEF2	Q9Y6D5	1785 aa		4.21	□□□□□ -1.74
HTT-210	ENST00000512909	COL4A1	P02462	1669 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909		A0A1W2PQ09	198 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	EIF4E1B	A6NMX2	242 aa	Known RBP	4.2	□□□□□ -1.74
HTT-210	ENST00000512909	LACTBL1	A8MY62	500 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	SPINT2	O43291	252 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	IDH1	O75874	414 aa	Known RBP	4.2	□□□□□ -1.74
HTT-210	ENST00000512909	TPPP	O94811	219 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	BAG3	O95817	575 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	CYC1	P08574	325 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	POR	P16435	677 aa	Predicted RBP	4.2	□□□□□ -1.74
HTT-210	ENST00000512909	GJA1	P17302	382 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	BDKRB2	P30411	391 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	MAPK4	P31152	587 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	KRT20	P35900	424 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	GNL1	P36915	607 aa	Predicted RBP	4.2	□□□□□ -1.74
HTT-210	ENST00000512909	EIF2S3	P41091	472 aa	Known RBP	4.2	□□□□□ -1.74
HTT-210	ENST00000512909	BTD	P43251	543 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	MXI1	P50539	228 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	CLCN3	P51790	818 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	RRP1	P56182	461 aa	Known RBP	4.2	□□□□□ -1.74
HTT-210	ENST00000512909	ECT2L	Q008S8	904 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	MECOM	Q03112	1051 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	CDC16	Q13042	620 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	STK4	Q13043	487 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	ACVR2B	Q13705	512 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	KCNC3	Q14003	757 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	HNF4G	Q14541	408 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	SLC39A14	Q15043	492 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	NTRK2	Q16620	822 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	C2orf68	Q2NKX9	166 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	EIF2S3L	Q2VIR3	472 aa	Known RBP	4.2	□□□□□ -1.74
HTT-210	ENST00000512909	AMZ1	Q400G9	498 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	ATP13A5	Q4VNC0	1218 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	XKR9	Q5GH70	373 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	NAA16	Q6N069	864 aa	Predicted RBP	4.2	□□□□□ -1.74
HTT-210	ENST00000512909	APOBEC3H	Q6NTF7	200 aa	Known RBP	4.2	□□□□□ -1.74
HTT-210	ENST00000512909	CDC42EP5	Q6NZY7	148 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	DUS1L	Q6P1R4	473 aa	Known RBP	4.2	□□□□□ -1.74
HTT-210	ENST00000512909	WDR73	Q6P4I2	378 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	CCNI2	Q6ZMN8	369 aa	Predicted RBP	4.2	□□□□□ -1.74
HTT-210	ENST00000512909	DPPA4	Q7L190	304 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	ERC1	Q8IUD2	1116 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	POC5	Q8NA72	575 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	FAM216A	Q8WUB2	273 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	FAM151A	Q8WW52	585 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	VOPP1	Q96AW1	172 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	OPTN	Q96CV9	577 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	ACOX2	Q99424	681 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	SEPT5	Q99719	369 aa	Predicted RBP	4.2	□□□□□ -1.74
HTT-210	ENST00000512909	SEMA3C	Q99985	751 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	C1QTNF5	Q9BXJ0	243 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	HRH4	Q9H3N8	390 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	OSGEPL1	Q9H4B0	414 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.2	□□□□□ -1.74
HTT-210	ENST00000512909	DDX4	Q9NQI0	724 aa	Known RBP	4.2	□□□□□ -1.74
HTT-210	ENST00000512909	HMG20B	Q9P0W2	317 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	ABI3	Q9P2A4	366 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	UBA2	Q9UBT2	640 aa	Predicted RBP	4.2	□□□□□ -1.74
HTT-210	ENST00000512909	FBXL17	Q9UF56	701 aa		4.2	□□□□□ -1.74
HTT-210	ENST00000512909	DBNL	Q9UJU6	430 aa	Known RBP	4.2	□□□□□ -1.74

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