RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	PPARG	P37231	505 aa	Predicted RBP	10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	CASR	P41180	1078 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	GRIA1	P42261	906 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	MAGEA3	P43357	314 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	HK3	P52790	923 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	SRP54	P61011	504 aa	Known RBP	10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	TUBB4B	P68371	445 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	XIAP	P98170	497 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	CAV1	Q03135	178 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	EIF2B5	Q13144	721 aa	Known RBP	10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	POU6F1	Q14863	301 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	CLCA4	Q14CN2	919 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	TBR1	Q16650	682 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	LDLRAP1	Q5SW96	308 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	CERCAM	Q5T4B2	595 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	TSTD2	Q5T7W7	516 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	LVRN	Q6Q4G3	990 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	ENPP7	Q6UWV6	458 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	RFLNA	Q6ZTI6	216 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	SNX20	Q7Z614	316 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	CTAGE6	Q86UF2	777 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	CAND1	Q86VP6	1230 aa	Known RBP	10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	HEATR4	Q86WZ0	1026 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	PHYKPL	Q8IUZ5	450 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	CCNJL	Q8IV13	435 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	CTAGE4	Q8IX94	777 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	FSTL5	Q8N475	847 aa	Predicted RBP	10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	MMGT1	Q8N4V1	131 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	TAB3	Q8N5C8	712 aa	Predicted RBP	10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	PPHLN1	Q8NEY8	458 aa	Known RBP	10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	ULK4	Q96C45	1275 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	LRRC39	Q96DD0	335 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	CDKN2AIPNL	Q96HQ2	116 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	ZNF514	Q96K75	400 aa	Predicted RBP	10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	TTC1	Q99614	292 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	FAM129A	Q9BZQ8	928 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	ZCCHC2	Q9C0B9	1178 aa	Known RBP	10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	BPIFA1	Q9NP55	256 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	GEMIN8	Q9NWZ8	242 aa	Known RBP	10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	TRNAU1AP	Q9NX07	287 aa	Known RBP	10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	WHRN	Q9P202	907 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	SPAST	Q9UBP0	616 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	KL	Q9UEF7	1012 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	CD84	Q9UIB8	345 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	PLAA	Q9Y263	795 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	TCAF1	Q9Y4C2	921 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	SLC30A1	Q9Y6M5	507 aa		10.14	□□□□□ -0.79
PTPN20-222	ENST00000509774	PDZD2	O15018	2839 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	HIVEP3	Q5T1R4	2406 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	FAM237B	A0A1B0GVD1	139 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	TCRBV7S3A2	A0A539	114 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	ESPN	B1AK53	854 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	TPP1	O14773	563 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	RAD51C	O43502	376 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	SRP72	O76094	671 aa	Known RBP	10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	SEC31A	O94979	1220 aa	Known RBP	10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	TTC4	O95801	387 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	CEACAM5	P06731	702 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	ITGAL	P20701	1170 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	DUSP3	P51452	185 aa	Predicted RBP	10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	SESN2	P58004	480 aa	Predicted RBP	10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	RELB	Q01201	579 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	CALCOCO2	Q13137	446 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	NFATC2	Q13469	925 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	SEPT6	Q14141	434 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	ELOC	Q15369	112 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	ISX	Q2M1V0	245 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	DNAJC21	Q5F1R6	531 aa	Known RBP	10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	LYPLAL1	Q5VWZ2	237 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	DUPD1	Q68J44	220 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	HIBCH	Q6NVY1	386 aa	Predicted RBP	10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	CERS6	Q6ZMG9	384 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	CLEC14A	Q86T13	490 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	PDIK1L	Q8N165	341 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	PELI3	Q8N2H9	469 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	SCG3	Q8WXD2	468 aa	Known RBP	10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	SERPINB12	Q96P63	405 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	AGAP2	Q99490	1192 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	DUSP23	Q9BVJ7	150 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	LGR4	Q9BXB1	951 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	FOXP3	Q9BZS1	431 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	CHRAC1	Q9NRG0	131 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	DNAJC28	Q9NX36	388 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	SAMD15	Q9P1V8	674 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	ANAPC5	Q9UJX4	755 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	SOX13	Q9UN79	622 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	GPR34	Q9UPC5	381 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	HIVEP1	P15822	2718 aa		10.13	□□□□□ -0.79
PTPN20-222	ENST00000509774	ESPL1	Q14674	2120 aa		10.12	□□□□□ -0.79
PTPN20-222	ENST00000509774	TRBV5-4	A0A0C4DH59	114 aa		10.12	□□□□□ -0.79
PTPN20-222	ENST00000509774	PRSS38	A1L453	326 aa		10.12	□□□□□ -0.79
PTPN20-222	ENST00000509774	TMEM202	A6NGA9	273 aa		10.12	□□□□□ -0.79
PTPN20-222	ENST00000509774	FADS2P1	A8MWK0	482 aa		10.12	□□□□□ -0.79
PTPN20-222	ENST00000509774	LMO7DN	F2Z398	122 aa		10.12	□□□□□ -0.79
PTPN20-222	ENST00000509774		F8W8V4	182 aa		10.12	□□□□□ -0.79
PTPN20-222	ENST00000509774	GAPDHS	O14556	408 aa	Predicted RBP	10.12	□□□□□ -0.79
PTPN20-222	ENST00000509774	CHUK	O15111	745 aa		10.12	□□□□□ -0.79
PTPN20-222	ENST00000509774	SCAMP1	O15126	338 aa		10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms