RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 PCDHB3Q9Y5E6 796 aa13.07□□□□□ -0.32
DDX41-210ENST00000509576 MYO9AB2RTY4 2548 aa13.06□□□□□ -0.32
DDX41-210ENST00000509576 LRBAP50851 2863 aa13.06□□□□□ -0.32
DDX41-210ENST00000509576 OR5K3A6NET4 321 aa13.06□□□□□ -0.32
DDX41-210ENST00000509576 APOL1O14791 398 aa13.06□□□□□ -0.32
DDX41-210ENST00000509576 RECKO95980 971 aa13.06□□□□□ -0.32
DDX41-210ENST00000509576 H2AFZP0C0S5 128 aa13.06□□□□□ -0.32
DDX41-210ENST00000509576 TMEM253P0C7T8 217 aa13.06□□□□□ -0.32
DDX41-210ENST00000509576 PTPN4P29074 926 aa13.06□□□□□ -0.32
DDX41-210ENST00000509576 PBLDP30039 288 aaPredicted RBP13.06□□□□□ -0.32
DDX41-210ENST00000509576 CDKN2BP42772 138 aa13.06□□□□□ -0.32
DDX41-210ENST00000509576 MSLNQ13421 630 aaPredicted RBP13.06□□□□□ -0.32
DDX41-210ENST00000509576 PAPD7Q5XG87 772 aaKnown RBP13.06□□□□□ -0.32
DDX41-210ENST00000509576 TMEM220Q6QAJ8 160 aa13.06□□□□□ -0.32
DDX41-210ENST00000509576 H2AFVQ71UI9 128 aa13.06□□□□□ -0.32
DDX41-210ENST00000509576 D2HGDHQ8N465 521 aa13.06□□□□□ -0.32
DDX41-210ENST00000509576 SLC25A41Q8N5S1 370 aa13.06□□□□□ -0.32
DDX41-210ENST00000509576 DDHD1Q8NEL9 900 aa13.06□□□□□ -0.32
DDX41-210ENST00000509576 ZDHHC12Q96GR4 267 aa13.06□□□□□ -0.32
DDX41-210ENST00000509576 RMDN2Q96LZ7 410 aa13.06□□□□□ -0.32
DDX41-210ENST00000509576 CHST8Q9H2A9 424 aa13.06□□□□□ -0.32
DDX41-210ENST00000509576 C10orf88Q9H8K7 445 aa13.06□□□□□ -0.32
DDX41-210ENST00000509576 SPTLC3Q9NUV7 552 aa13.06□□□□□ -0.32
DDX41-210ENST00000509576 KCND3Q9UK17 655 aa13.06□□□□□ -0.32
DDX41-210ENST00000509576 RARRES3Q9UL19 164 aa13.06□□□□□ -0.32
DDX41-210ENST00000509576 LUC7L2Q9Y383 392 aaKnown RBP13.06□□□□□ -0.32
DDX41-210ENST00000509576 MAP4K5Q9Y4K4 846 aa13.06□□□□□ -0.32
DDX41-210ENST00000509576 CROCCQ5TZA2 2017 aa13.05□□□□□ -0.32
DDX41-210ENST00000509576 A0A0A6YYK5 440 aaPredicted RBP13.05□□□□□ -0.32
DDX41-210ENST00000509576 SYCE3A1L190 88 aa13.05□□□□□ -0.32
DDX41-210ENST00000509576 ARGFXA6NJG6 315 aa13.05□□□□□ -0.32
DDX41-210ENST00000509576 C21orf140B9A014 251 aa13.05□□□□□ -0.32
DDX41-210ENST00000509576 CEACAM4O75871 244 aa13.05□□□□□ -0.32
DDX41-210ENST00000509576 KRT1P04264 644 aa13.05□□□□□ -0.32
DDX41-210ENST00000509576 MTHFD1P11586 935 aaKnown RBP13.05□□□□□ -0.32
DDX41-210ENST00000509576 RORAP35398 523 aa13.05□□□□□ -0.32
DDX41-210ENST00000509576 MARCKSL1P49006 195 aa13.05□□□□□ -0.32
DDX41-210ENST00000509576 PDK1Q15118 436 aa13.05□□□□□ -0.32
DDX41-210ENST00000509576 ZNF658BQ4V348 819 aaPredicted RBP13.05□□□□□ -0.32
DDX41-210ENST00000509576 PLEKHS1Q5SXH7 462 aa13.05□□□□□ -0.32
DDX41-210ENST00000509576 METRNLQ641Q3 311 aa13.05□□□□□ -0.32
DDX41-210ENST00000509576 FAM198BQ6UWH4 519 aa13.05□□□□□ -0.32
DDX41-210ENST00000509576 DET1Q7L5Y6 550 aa13.05□□□□□ -0.32
DDX41-210ENST00000509576 DAAM2Q86T65 1068 aa13.05□□□□□ -0.32
DDX41-210ENST00000509576 AMZ2Q86W34 360 aa13.05□□□□□ -0.32
DDX41-210ENST00000509576 VSIG1Q86XK7 387 aa13.05□□□□□ -0.32
DDX41-210ENST00000509576 RBM12BQ8IXT5 1001 aaKnown RBP13.05□□□□□ -0.32
DDX41-210ENST00000509576 ZNF567Q8N184 647 aa13.05□□□□□ -0.32
DDX41-210ENST00000509576 SIDT2Q8NBJ9 832 aaKnown RBP13.05□□□□□ -0.32
DDX41-210ENST00000509576 CTNNBL1Q8WYA6 563 aaPredicted RBP13.05□□□□□ -0.32
DDX41-210ENST00000509576 UBXN4Q92575 508 aa13.05□□□□□ -0.32
DDX41-210ENST00000509576 WWP1Q9H0M0 922 aa13.05□□□□□ -0.32
DDX41-210ENST00000509576 PLEKHB1Q9UF11 243 aaPredicted RBP13.05□□□□□ -0.32
DDX41-210ENST00000509576 TLCD2A6NGC4 264 aa13.04□□□□□ -0.32
DDX41-210ENST00000509576 MASP2O00187 686 aa13.04□□□□□ -0.32
DDX41-210ENST00000509576 HCRTR1O43613 425 aa13.04□□□□□ -0.32
DDX41-210ENST00000509576 SPAM1P38567 509 aa13.04□□□□□ -0.32
DDX41-210ENST00000509576 ITGA1P56199 1179 aa13.04□□□□□ -0.32
DDX41-210ENST00000509576 FOXL2P58012 376 aa13.04□□□□□ -0.32
DDX41-210ENST00000509576 MRPL49Q13405 166 aaKnown RBP13.04□□□□□ -0.32
DDX41-210ENST00000509576 SLC1A5Q15758 541 aa13.04□□□□□ -0.32
DDX41-210ENST00000509576 C4orf17Q53FE4 359 aa13.04□□□□□ -0.32
DDX41-210ENST00000509576 RFX6Q8HWS3 928 aa13.04□□□□□ -0.32
DDX41-210ENST00000509576 RBMXL3Q8N7X1 1067 aaKnown RBP13.04□□□□□ -0.32
DDX41-210ENST00000509576 CPT1CQ8TCG5 803 aa13.04□□□□□ -0.32
DDX41-210ENST00000509576 DTX3LQ8TDB6 740 aa13.04□□□□□ -0.32
DDX41-210ENST00000509576 ZNF830Q96NB3 372 aaPredicted RBP13.04□□□□□ -0.32
DDX41-210ENST00000509576 DNAJC7Q99615 494 aa13.04□□□□□ -0.32
DDX41-210ENST00000509576 NUDT9Q9BW91 350 aa13.04□□□□□ -0.32
DDX41-210ENST00000509576 TLR10Q9BXR5 811 aa13.04□□□□□ -0.32
DDX41-210ENST00000509576 XPO4Q9C0E2 1151 aaKnown RBP13.04□□□□□ -0.32
DDX41-210ENST00000509576 RAD18Q9NS91 495 aa13.04□□□□□ -0.32
DDX41-210ENST00000509576 IMP3Q9NV31 184 aaKnown RBP13.04□□□□□ -0.32
DDX41-210ENST00000509576 FAM8A1Q9UBU6 413 aa13.04□□□□□ -0.32
DDX41-210ENST00000509576 SLC24A2Q9UI40 661 aa13.04□□□□□ -0.32
DDX41-210ENST00000509576 BTRCQ9Y297 605 aa13.04□□□□□ -0.32
DDX41-210ENST00000509576 PCDHGA9Q9Y5G4 932 aaKnown RBP13.04□□□□□ -0.32
DDX41-210ENST00000509576 ARL5AQ9Y689 179 aa13.04□□□□□ -0.32
DDX41-210ENST00000509576 CTSBP07858 339 aa13.03□□□□□ -0.32
DDX41-210ENST00000509576 CCNYL3P0C7X3 344 aa13.03□□□□□ -0.32
DDX41-210ENST00000509576 COL8A1P27658 744 aa13.03□□□□□ -0.32
DDX41-210ENST00000509576 CCL11P51671 97 aa13.03□□□□□ -0.32
DDX41-210ENST00000509576 XIAPP98170 497 aa13.03□□□□□ -0.32
DDX41-210ENST00000509576 DNTTIP2Q5QJE6 756 aaKnown RBP13.03□□□□□ -0.32
DDX41-210ENST00000509576 FNBP1LQ5T0N5 605 aa13.03□□□□□ -0.32
DDX41-210ENST00000509576 ZFYVE27Q5T4F4 411 aa13.03□□□□□ -0.32
DDX41-210ENST00000509576 ZNF385CQ66K41 422 aaPredicted RBP13.03□□□□□ -0.32
DDX41-210ENST00000509576 SYVN1Q86TM6 617 aa13.03□□□□□ -0.32
DDX41-210ENST00000509576 GALNT11Q8NCW6 608 aa13.03□□□□□ -0.32
DDX41-210ENST00000509576 FDCSPQ8NFU4 85 aa13.03□□□□□ -0.32
DDX41-210ENST00000509576 OR1L3Q8NH93 324 aa13.03□□□□□ -0.32
DDX41-210ENST00000509576 GDAP1Q8TB36 358 aa13.03□□□□□ -0.32
DDX41-210ENST00000509576 BLOC1S5Q8TDH9 187 aa13.03□□□□□ -0.32
DDX41-210ENST00000509576 HAUS1Q96CS2 278 aa13.03□□□□□ -0.32
DDX41-210ENST00000509576 FCRL4Q96PJ5 515 aa13.03□□□□□ -0.32
DDX41-210ENST00000509576 ING2Q9H160 280 aa13.03□□□□□ -0.32
DDX41-210ENST00000509576 PDE7BQ9NP56 450 aa13.03□□□□□ -0.32
DDX41-210ENST00000509576 HAUS2Q9NVX0 235 aa13.03□□□□□ -0.32
DDX41-210ENST00000509576 SMOXQ9NWM0 555 aa13.03□□□□□ -0.32
DDX41-210ENST00000509576 HRASLS2Q9NWW9 162 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms