RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 PIKFYVEQ9Y2I7 2098 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 ZCWPW2A0A1B0GU75 182 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 UBA6A0AVT1 1052 aaPredicted RBP8.97□□□□□ -0.97
NUP54-207ENST00000508583 ESPNB1AK53 854 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 E7ESA3 106 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 TMX2-CTNND1H3BSU7 103 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 KDM1AO60341 852 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 NOBOXO60393 691 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 SPAG6O75602 509 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 VIPP01282 170 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 ESR1P03372 595 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 RPN2P04844 631 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 APOA4P06727 396 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 ADRB1P08588 477 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 GSTA2P09210 222 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 XRCC1P18887 633 aaPredicted RBP8.97□□□□□ -0.97
NUP54-207ENST00000508583 ARNTP27540 789 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 ELK3P41970 407 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 ARCN1P48444 511 aaKnown RBP8.97□□□□□ -0.97
NUP54-207ENST00000508583 CDKN1CP49918 316 aaPredicted RBP8.97□□□□□ -0.97
NUP54-207ENST00000508583 PLTPP55058 493 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 GPLD1P80108 840 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 B4GALNT1Q00973 533 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 GUCY2DQ02846 1103 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 PDIA2Q13087 525 aaKnown RBP8.97□□□□□ -0.97
NUP54-207ENST00000508583 CUL1Q13616 776 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 SPIDRQ14159 915 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 KRT33BQ14525 404 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 NR1D2Q14995 579 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 SMAD1Q15797 465 aaKnown RBP8.97□□□□□ -0.97
NUP54-207ENST00000508583 METRNLQ641Q3 311 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 KLHL35Q6PF15 583 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 CES3Q6UWW8 571 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 ZNF438Q7Z4V0 828 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 GALNT7Q86SF2 657 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 C17orf82Q86X59 251 aaPredicted RBP8.97□□□□□ -0.97
NUP54-207ENST00000508583 CFAP206Q8IYR0 622 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 ZBED8Q8IZ13 594 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 NAGSQ8N159 534 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 CACTIN-AS1Q8N1I8 211 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 ARL14Q8N4G2 192 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 OR10G6Q8NH81 332 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 SLC37A2Q8TED4 501 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 ZFPM2Q8WW38 1151 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 ASZ1Q8WWH4 475 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 CDKL2Q92772 493 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 ART4Q93070 314 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 CCDC74AQ96AQ1 378 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 CERS2Q96G23 380 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 SLC38A3Q99624 504 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 CCDC3Q9BQI4 270 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 CARD6Q9BX69 1037 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 ZMYND15Q9H091 742 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 UCK1Q9HA47 277 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 PRDM8Q9NQV8 689 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 TOR4AQ9NXH8 423 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 CPNE7Q9UBL6 633 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 CORO1CQ9ULV4 474 aaPredicted RBP8.97□□□□□ -0.97
NUP54-207ENST00000508583 CHMP2BQ9UQN3 213 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 TEX264Q9Y6I9 313 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 COLEC10Q9Y6Z7 277 aa8.97□□□□□ -0.97
NUP54-207ENST00000508583 LY6G6EA0A0G2JKS1 128 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 A6NCN8 305 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 PRR19A6NJB7 356 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 E5RI56 91 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 OPA1O60313 960 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 RPL10P27635 214 aaKnown RBP8.96□□□□□ -0.98
NUP54-207ENST00000508583 MAPK9P45984 424 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 CD151P48509 253 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 PPM1FP49593 454 aaPredicted RBP8.96□□□□□ -0.98
NUP54-207ENST00000508583 EPHA4P54764 986 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 EIF3BP55884 814 aaKnown RBP8.96□□□□□ -0.98
NUP54-207ENST00000508583 MAZP56270 477 aaKnown RBP8.96□□□□□ -0.98
NUP54-207ENST00000508583 SLC7A5Q01650 507 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 NFE2L1Q14494 772 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 SEPT7Q16181 437 aaKnown RBP8.96□□□□□ -0.98
NUP54-207ENST00000508583 TTLL9Q3SXZ7 439 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 N4BP2L1Q5TBK1 243 aaPredicted RBP8.96□□□□□ -0.98
NUP54-207ENST00000508583 STEAP4Q687X5 459 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 UGT3A1Q6NUS8 523 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 RBM44Q6ZP01 1051 aaKnown RBP8.96□□□□□ -0.98
NUP54-207ENST00000508583 OTOAQ7RTW8 1153 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 RAB44Q7Z6P3 723 aaPredicted RBP8.96□□□□□ -0.98
NUP54-207ENST00000508583 CNTN4Q8IWV2 1026 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 PALM2Q8IXS6 379 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 IFT20Q8IY31 132 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 CLDN19Q8N6F1 224 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 FBXO36Q8NEA4 188 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 ELMO1Q92556 727 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 CFAP36Q96G28 342 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 AHCYL2Q96HN2 611 aaKnown RBP8.96□□□□□ -0.98
NUP54-207ENST00000508583 FCRL3Q96P31 734 aaPredicted RBP8.96□□□□□ -0.98
NUP54-207ENST00000508583 DEPDC7Q96QD5 511 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 LRRC1Q9BTT6 524 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 COG4Q9H9E3 785 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 L2HGDHQ9H9P8 463 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 KCNK4Q9NYG8 393 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 GRHL1Q9NZI5 618 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 ZFATQ9P243 1243 aa8.96□□□□□ -0.98
NUP54-207ENST00000508583 MARCH4Q9P2E8 410 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms