RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 ADCK1Q86TW2 530 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CLEC4FQ8N1N0 589 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 TTC9BQ8N6N2 239 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 GOT1L1Q8NHS2 421 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 FAM136AQ96C01 138 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 KLHL29Q96CT2 875 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 AP2M1Q96CW1 435 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 PRMT1Q99873 361 aaKnown RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 FAIM2Q9BWQ8 316 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 IL25Q9H293 177 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 RMND5AQ9H871 391 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 POLR1BQ9H9Y6 1135 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 TRPV4Q9HBA0 871 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 HSFX1Q9UBD0 423 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 MMP17Q9ULZ9 603 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 ASF1AQ9Y294 204 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 TSC22D4Q9Y3Q8 395 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 FAM186AA6NE01 2351 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 IGKV6D-21A0A0A0MT36 114 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 A0A0J9YVX5 310 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 SPAARA0A1B0GVQ0 90 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF840PA6NDX5 716 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 UPK3BL1B0FP48 263 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 UPK3BL2E5RIL1 263 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 SLC28A1O00337 649 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 PIRO00625 290 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 AQP9O43315 295 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 UBXN7O94888 489 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CYB5AP00167 134 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 JCHAINP01591 159 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 AOC1P19801 751 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 NFKB1P19838 968 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 PIK3R1P27986 724 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 NTSP30990 170 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 HOXA11P31270 313 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 GPD2P43304 727 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 PRKAG1P54619 331 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 RAD23BP54727 409 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 RRADP55042 308 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CLDN2P57739 230 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 GNA12Q03113 381 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 RIN1Q13671 783 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CYP51A1Q16850 503 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 SLC25A52Q3SY17 297 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 C1orf189Q5VU69 101 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 PAOXQ6QHF9 649 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 SARM1Q6SZW1 724 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CLEC20AQ6ZU45 233 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 NEK10Q6ZWH5 1172 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 ABHD13Q7L211 337 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 ESX1Q8N693 406 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 OR10T2Q8NGX3 314 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 DTX3LQ8TDB6 740 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CASKIN2Q8WXE0 1202 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 TRMT2BQ96GJ1 504 aaKnown RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 AP1M1Q9BXS5 423 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CEP44Q9C0F1 390 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 ASB8Q9H765 288 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 IL21RQ9HBE5 538 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 OSER1Q9NX31 292 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 GDAP2Q9NXN4 497 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 MARK1Q9P0L2 795 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 AURKCQ9UQB9 309 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 HYKKA2RU49 373 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 MEIS3P2A8K0S8 358 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 FCHO1O14526 889 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 FOXP2O15409 715 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 DHX15O43143 795 aaKnown RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 KDELR3O43731 214 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 HYAL3O43820 417 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CYP11A1P05108 521 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 PDHA1P08559 390 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 MYL2P10916 166 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 ACP5P13686 325 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 FEN1P39748 380 aaKnown RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CASP5P51878 434 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 KCNK10P57789 538 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 RAPSNQ13702 412 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 AUHQ13825 339 aaKnown RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 C2CD6Q53TS8 623 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 HES3Q5TGS1 186 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CFAP161Q6P656 301 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 FAM171BQ6P995 826 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 BHLHB9Q6PI77 547 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 C6orf15Q6UXA7 325 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 PAGE2Q7Z2X7 111 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 METTL27Q8N6F8 245 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 EMC1Q8N766 993 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 OR2W6PQ8NHA6 318 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 SLC35G2Q8TBE7 412 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 GFM2Q969S9 779 aaKnown RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 NACC2Q96BF6 587 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 SLC39A13Q96H72 371 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF845Q96IR2 970 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-208ENST00000508342 HSFY1Q96LI6 401 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 PPP1R36Q96LQ0 422 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF354BQ96LW1 612 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 CAMK1GQ96NX5 476 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 HIST1H2AAQ96QV6 131 aa2.92□□□□□ -1.94
NEDD4-208ENST00000508342 OR6C1Q96RD1 312 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms