RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 RHOCP08134 193 aa16.72■□□□□ 0.27
LIN54-204ENST00000505397 HRH2P25021 359 aa16.72■□□□□ 0.27
LIN54-204ENST00000505397 IL12AP29459 219 aa16.72■□□□□ 0.27
LIN54-204ENST00000505397 RGRP47804 291 aa16.72■□□□□ 0.27
LIN54-204ENST00000505397 ESRRGP62508 458 aa16.72■□□□□ 0.27
LIN54-204ENST00000505397 HTRA4P83105 476 aaPredicted RBP16.72■□□□□ 0.27
LIN54-204ENST00000505397 ZNF177Q13360 481 aaPredicted RBP16.72■□□□□ 0.27
LIN54-204ENST00000505397 PATL1Q86TB9 770 aaKnown RBP16.72■□□□□ 0.27
LIN54-204ENST00000505397 KLHL23Q8NBE8 558 aa16.72■□□□□ 0.27
LIN54-204ENST00000505397 PLEKHG4BQ96PX9 1271 aa16.72■□□□□ 0.27
LIN54-204ENST00000505397 HGH1Q9BTY7 390 aa16.72■□□□□ 0.27
LIN54-204ENST00000505397 SPON2Q9BUD6 331 aa16.72■□□□□ 0.27
LIN54-204ENST00000505397 SEPT3Q9UH03 358 aa16.72■□□□□ 0.27
LIN54-204ENST00000505397 CDH7Q9ULB5 785 aa16.72■□□□□ 0.27
LIN54-204ENST00000505397 ARIH1Q9Y4X5 557 aaPredicted RBP16.72■□□□□ 0.27
LIN54-204ENST00000505397 GMEB1Q9Y692 573 aa16.72■□□□□ 0.27
LIN54-204ENST00000505397 FAM234BA2RU67 622 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 BTN3A1O00481 513 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 E2F3O00716 465 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 SNAP91O60641 907 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 SNX2O60749 519 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 CHEK2O96017 543 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 PYGLP06737 847 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 ENO2P09104 434 aaPredicted RBP16.71■□□□□ 0.27
LIN54-204ENST00000505397 NCK1P16333 377 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 VARSP26640 1264 aaKnown RBP16.71■□□□□ 0.27
LIN54-204ENST00000505397 CAPGP40121 348 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 PTPRNQ16849 979 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 TBC1D25Q3MII6 688 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 AASDHQ4L235 1098 aaPredicted RBP16.71■□□□□ 0.27
LIN54-204ENST00000505397 CHST9Q7L1S5 443 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 C16orf59Q7L2K0 433 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 GLT6D1Q7Z4J2 308 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 DPP10Q8N608 796 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 OR7D4Q8NG98 312 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 OR56A4Q8NGH8 313 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 PROKR1Q8TCW9 393 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 LZICQ8WZA0 190 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 FBXL20Q96IG2 436 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 RPF2Q9H7B2 306 aaKnown RBP16.71■□□□□ 0.27
LIN54-204ENST00000505397 ZNF334Q9HCZ1 680 aaPredicted RBP16.71■□□□□ 0.27
LIN54-204ENST00000505397 SMPD3Q9NY59 655 aaPredicted RBP16.71■□□□□ 0.27
LIN54-204ENST00000505397 EBF1Q9UH73 591 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 FADS3Q9Y5Q0 445 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 HEMK1Q9Y5R4 338 aaPredicted RBP16.71■□□□□ 0.27
LIN54-204ENST00000505397 ZFC3H1O60293 1989 aaKnown RBP16.71■□□□□ 0.27
LIN54-204ENST00000505397 TSPAN3O60637 253 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 F11P03951 625 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 CDKN1CP49918 316 aaPredicted RBP16.71■□□□□ 0.27
LIN54-204ENST00000505397 OXCT1P55809 520 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 C6orf136Q5SQH8 315 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 ABRAXAS1Q6UWZ7 409 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 CCDC149Q6ZUS6 474 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 TMEM150AQ86TG1 271 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 IFNEQ86WN2 208 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 PROSER1Q86XN7 944 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 BADQ92934 168 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 RPL10LQ96L21 214 aaKnown RBP16.71■□□□□ 0.27
LIN54-204ENST00000505397 TMEM74Q96NL1 305 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 DOK1Q99704 481 aa16.71■□□□□ 0.27
LIN54-204ENST00000505397 CLOCKO15516 846 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 CXCL14O95715 111 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 PKMP14618 531 aaKnown RBP16.7■□□□□ 0.26
LIN54-204ENST00000505397 GABRR2P28476 465 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 RPS9P46781 194 aaKnown RBP16.7■□□□□ 0.26
LIN54-204ENST00000505397 NUP107P57740 925 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 ADARB1P78563 741 aaKnown RBP16.7■□□□□ 0.26
LIN54-204ENST00000505397 CTSL3PQ5NE16 218 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 Q6ZSR9 355 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 ZFAND4Q86XD8 727 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 CLVS1Q8IUQ0 354 aaPredicted RBP16.7■□□□□ 0.26
LIN54-204ENST00000505397 ELMOD1Q8N336 334 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 BPIFB1Q8TDL5 484 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 MRPS31Q92665 395 aaKnown RBP16.7■□□□□ 0.26
LIN54-204ENST00000505397 BIRC7Q96CA5 298 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 ZNF382Q96SR6 550 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 ACOX2Q99424 681 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 PFDN4Q9NQP4 134 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 INTS7Q9NVH2 962 aaKnown RBP16.7■□□□□ 0.26
LIN54-204ENST00000505397 VPS9D1Q9Y2B5 631 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 ASB1Q9Y576 335 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 H3BNC9 293 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 INSIG1O15503 277 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 RIMKLAQ8IXN7 391 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 PIANPQ8IYJ0 282 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 DHRSXQ8N5I4 330 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 ARL14EPQ8N8R7 260 aaPredicted RBP16.7■□□□□ 0.26
LIN54-204ENST00000505397 TTC16Q8NEE8 873 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 RNF217Q8TC41 542 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 CD200R1Q8TD46 325 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 CYGBQ8WWM9 190 aa16.7■□□□□ 0.26
LIN54-204ENST00000505397 CLP1Q92989 425 aaKnown RBP16.7■□□□□ 0.26
LIN54-204ENST00000505397 C12orf43Q96C57 262 aaKnown RBP16.7■□□□□ 0.26
LIN54-204ENST00000505397 TDRD1Q9BXT4 1180 aaKnown RBP16.7■□□□□ 0.26
LIN54-204ENST00000505397 YTHDF1Q9BYJ9 559 aaKnown RBP16.7■□□□□ 0.26
LIN54-204ENST00000505397 UBA2Q9UBT2 640 aaPredicted RBP16.7■□□□□ 0.26
LIN54-204ENST00000505397 DENND4CQ5VZ89 1909 aa16.69■□□□□ 0.26
LIN54-204ENST00000505397 ILVBLA1L0T0 632 aa16.69■□□□□ 0.26
LIN54-204ENST00000505397 TRIM64BA6NI03 449 aa16.69■□□□□ 0.26
LIN54-204ENST00000505397 NCF1BA6NI72 391 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms