RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 NAGSQ8N159 534 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 TFB2MQ9H5Q4 396 aaKnown RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 SARS2Q9NP81 518 aaKnown RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 MRPL40Q9NQ50 206 aaKnown RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 RXFP3Q9NSD7 469 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 IGSF5Q9NSI5 407 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 C20orf96Q9NUD7 363 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 NCKIPSDQ9NZQ3 722 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 SLC17A6Q9P2U8 582 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 COPG2Q9UBF2 871 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 DCHS1Q96JQ0 3298 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 LILRA5A6NI73 299 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 AQP9O43315 295 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 GCGRP47871 477 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 CCT8P50990 548 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 SP140Q13342 867 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 KLHL38Q2WGJ6 581 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 HSP90AA5PQ58FG0 334 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 PTAR1Q7Z6K3 402 aaPredicted RBP8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 GANCQ8TET4 914 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 SKA1Q96BD8 255 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 C1QTNF3Q9BXJ4 246 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 FAM96AQ9H5X1 160 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 TM7SF3Q9NS93 570 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 UCKL1Q9NWZ5 548 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 SCHIP1Q9P0W5 487 aaPredicted RBP8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 SLC30A1Q9Y6M5 507 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 ARID1BQ8NFD5 2236 aaPredicted RBP8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 FTH1P02794 183 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 SLC35E2BP0CK96 405 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 HTR1BP28222 390 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 HOXD11P31277 338 aaPredicted RBP8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 GGT5P36269 586 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 SLC18A1P54219 525 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 TRIM61Q5EBN2 209 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 TEX35Q5T0J7 233 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 CEP97Q8IW35 865 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 GSPT2Q8IYD1 628 aaKnown RBP8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 DEFB119Q8N690 84 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 OR6Y1Q8NGX8 325 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 UBTD2Q8WUN7 234 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 C9orf72Q96LT7 481 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 CYTH2Q99418 400 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 TMEM168Q9H0V1 697 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 OR2AG1Q9H205 316 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 IARS2Q9NSE4 1012 aaKnown RBP8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 DLL3Q9NYJ7 618 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 IL1RAPL1Q9NZN1 696 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 ZNF624Q9P2J8 865 aaPredicted RBP8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 WDR37Q9Y2I8 494 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 SNRNP200O75643 2136 aaKnown RBP8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 TDRD6O60522 2096 aaKnown RBP8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 AGPSO00116 658 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 NEMP1O14524 444 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 SLC30A4O14863 429 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 FLRT2O43155 660 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 C9P02748 559 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 SHBGP04278 402 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 SBK3P0C264 359 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 ZNF37AP17032 561 aaPredicted RBP8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 TNNT3P45378 269 aaPredicted RBP8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 PPARDQ03181 441 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 SEPT6Q14141 434 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 CYP2A13Q16696 494 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 RBM20Q5T481 1227 aaKnown RBP8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 ALS2CLQ60I27 953 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 IGF2-ASQ6U949 168 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 CARFQ8N187 725 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 ACMSDQ8TDX5 336 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 MTBPQ96DY7 904 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 NUSAP1Q9BXS6 441 aaKnown RBP8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 DERL2Q9GZP9 239 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 CAAP1Q9H8G2 361 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 SPATS2LQ9NUQ6 558 aaKnown RBP8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 SPASTQ9UBP0 616 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 TBC1D29Q9UFV1 150 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 IKZF3Q9UKT9 509 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 TMEM98Q9Y2Y6 226 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 PCM1Q15154 2024 aa8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 MN1Q10571 1320 aaPredicted RBP8.12□□□□□ -1.11
CDC42SE2-208ENST00000505065 KIR2DS5A0A0G2JLQ3 304 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 A0A0G2JNG1 304 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 H3BM21 787 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 KIR2DS3K7RE56 304 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 YY2O15391 372 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 PHBP35232 272 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 PPARGP37231 505 aaPredicted RBP8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 GPR3P46089 330 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 SERPINB9P50453 376 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 PRAMEP78395 509 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 KIR2DS5Q14953 304 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 ELOCQ15369 112 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 ZXDCQ2QGD7 858 aaPredicted RBP8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 UAP1L1Q3KQV9 507 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 HECTD2Q5U5R9 776 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 ZCCHC8Q6NZY4 707 aaKnown RBP8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 LAYNQ6UX15 382 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 TRIM74Q86UV6 250 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 VRK3Q8IV63 474 aa8.11□□□□□ -1.11
CDC42SE2-208ENST00000505065 CENPLQ8N0S6 344 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms