RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 SYTL1Q8IYJ3 562 aa6.73□□□□□ -1.33
NPIPB3-203ENST00000504841 D2HGDHQ8N465 521 aa6.73□□□□□ -1.33
NPIPB3-203ENST00000504841 GLIS1Q8NBF1 620 aa6.73□□□□□ -1.33
NPIPB3-203ENST00000504841 CCNYQ8ND76 341 aa6.73□□□□□ -1.33
NPIPB3-203ENST00000504841 CPT1BQ92523 772 aa6.73□□□□□ -1.33
NPIPB3-203ENST00000504841 ZNF501Q96CX3 271 aaPredicted RBP6.73□□□□□ -1.33
NPIPB3-203ENST00000504841 EID2BQ96D98 161 aa6.73□□□□□ -1.33
NPIPB3-203ENST00000504841 CD180Q99467 661 aa6.73□□□□□ -1.33
NPIPB3-203ENST00000504841 SMAD5Q99717 465 aaKnown RBP6.73□□□□□ -1.33
NPIPB3-203ENST00000504841 SYT11Q9BT88 431 aa6.73□□□□□ -1.33
NPIPB3-203ENST00000504841 ADGRE3Q9BY15 652 aa6.73□□□□□ -1.33
NPIPB3-203ENST00000504841 RAB33BQ9H082 229 aa6.73□□□□□ -1.33
NPIPB3-203ENST00000504841 FANCEQ9HB96 536 aa6.73□□□□□ -1.33
NPIPB3-203ENST00000504841 MRPL47Q9HD33 250 aaKnown RBP6.73□□□□□ -1.33
NPIPB3-203ENST00000504841 BPIFA1Q9NP55 256 aa6.73□□□□□ -1.33
NPIPB3-203ENST00000504841 KCND1Q9NSA2 647 aa6.73□□□□□ -1.33
NPIPB3-203ENST00000504841 HRASLS2Q9NWW9 162 aa6.73□□□□□ -1.33
NPIPB3-203ENST00000504841 NTNG1Q9Y2I2 539 aa6.73□□□□□ -1.33
NPIPB3-203ENST00000504841 COPG1Q9Y678 874 aaKnown RBP6.73□□□□□ -1.33
NPIPB3-203ENST00000504841 PCSK5Q92824 1860 aa6.73□□□□□ -1.33
NPIPB3-203ENST00000504841 UTP20O75691 2785 aaKnown RBP6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 GSAPA4D1B5 854 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 RCCD1A6NED2 376 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 OR5K3A6NET4 321 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 SLC9B1P1A6NJY1 282 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 OR2AG2A6NM03 316 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 TMEM150CB9EJG8 249 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 C9J4A7 227 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 GPR39O43194 453 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 LRRTM2O43300 516 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 ZG16O60844 167 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 ZBTB11O95625 1053 aaPredicted RBP6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 MMP2P08253 660 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 RAB40ALP0C0E4 278 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 MTHFD1P11586 935 aaKnown RBP6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 CDK11BP21127 795 aaKnown RBP6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 CDH3P22223 829 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 CES1P23141 567 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 CA5AP35218 305 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 KPNA2P52292 529 aaKnown RBP6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 PER3P56645 1201 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 SLC25A11Q02978 314 aaKnown RBP6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 GBE1Q04446 702 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 ZBTB17Q13105 803 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 PIGHQ14442 188 aaPredicted RBP6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 LLGL1Q15334 1064 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 RPE65Q16518 533 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 ZFYVE27Q5T4F4 411 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 E4F1Q66K89 784 aaPredicted RBP6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 PDPK2PQ6A1A2 396 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 WASH2PQ6VEQ5 465 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 FAM83HQ6ZRV2 1179 aaPredicted RBP6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 DET1Q7L5Y6 550 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 ZNF571Q7Z3V5 609 aaPredicted RBP6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 IRF2BP2Q7Z5L9 587 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 C11orf96Q7Z7L8 435 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 ZC3H18Q86VM9 953 aaKnown RBP6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 AMZ2Q86W34 360 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 MCEMP1Q8IX19 187 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 DSELQ8IZU8 1212 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 SLC34A3Q8N130 599 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 ZADH2Q8N4Q0 377 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 OR8K5Q8NH50 307 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 OR1L3Q8NH93 324 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 NAT14Q8WUY8 206 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 UBE2Q2Q8WVN8 375 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 TEKT4Q8WW24 435 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 INPP5DQ92835 1189 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 TRIM11Q96F44 468 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 C12orf66Q96MD2 445 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 LRFN5Q96NI6 719 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 ERGIC2Q96RQ1 377 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 NLNQ9BYT8 704 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 KLHL25Q9H0H3 589 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 DEF6Q9H4E7 631 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 HAUS4Q9H6D7 363 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 ACTR5Q9H9F9 607 aaPredicted RBP6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 RAD18Q9NS91 495 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 IGSF5Q9NSI5 407 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 PCMTD2Q9NV79 361 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 SEMA5BQ9P283 1151 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 TSR3Q9UJK0 312 aaKnown RBP6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 ANAPC7Q9UJX3 599 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 ITGB1BP2Q9UKP3 347 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 TMPRSS11EQ9UL52 423 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 OSGIN2Q9Y236 505 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 PADI2Q9Y2J8 665 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 DOPEY1Q5JWR5 2465 aa6.72□□□□□ -1.33
NPIPB3-203ENST00000504841 SPENQ96T58 3664 aaKnown RBP6.71□□□□□ -1.33
NPIPB3-203ENST00000504841 PEX12O00623 359 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 AURKAO14965 403 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 POP7O75817 140 aaKnown RBP6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 SNRPB2P08579 225 aaKnown RBP6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 POLR2CP19387 275 aaPredicted RBP6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 HLA-DPA1P20036 260 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 MX2P20592 715 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 CCNCP24863 283 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 AKT1P31749 480 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 RORAP35398 523 aa6.71□□□□□ -1.34
NPIPB3-203ENST00000504841 FOLR3P41439 243 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms