RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 RDH14Q9HBH5 336 aa21.66■■□□□ 1.06
PTPN13-205ENST00000502971 UTP6Q9NYH9 597 aaKnown RBP21.66■■□□□ 1.06
PTPN13-205ENST00000502971 REV3LO60673 3130 aa21.66■■□□□ 1.06
PTPN13-205ENST00000502971 NPC1O15118 1278 aa21.65■■□□□ 1.06
PTPN13-205ENST00000502971 CPA2P48052 419 aa21.65■■□□□ 1.06
PTPN13-205ENST00000502971 AGTR2P50052 363 aa21.65■■□□□ 1.06
PTPN13-205ENST00000502971 GBX1Q14549 363 aa21.65■■□□□ 1.06
PTPN13-205ENST00000502971 UGT3A2Q3SY77 523 aa21.65■■□□□ 1.06
PTPN13-205ENST00000502971 TMEM52BQ4KMG9 183 aa21.65■■□□□ 1.06
PTPN13-205ENST00000502971 PLEKHS1Q5SXH7 462 aa21.65■■□□□ 1.06
PTPN13-205ENST00000502971 FAM46CQ5VWP2 391 aa21.65■■□□□ 1.06
PTPN13-205ENST00000502971 CLEC6AQ6EIG7 209 aa21.65■■□□□ 1.06
PTPN13-205ENST00000502971 ERN2Q76MJ5 926 aaKnown RBP21.65■■□□□ 1.06
PTPN13-205ENST00000502971 ZNF765Q7L2R6 523 aa21.65■■□□□ 1.06
PTPN13-205ENST00000502971 OR56A4Q8NGH8 313 aa21.65■■□□□ 1.06
PTPN13-205ENST00000502971 GLYATL1Q969I3 302 aa21.65■■□□□ 1.06
PTPN13-205ENST00000502971 RAB7BQ96AH8 199 aa21.65■■□□□ 1.06
PTPN13-205ENST00000502971 HGH1Q9BTY7 390 aa21.65■■□□□ 1.06
PTPN13-205ENST00000502971 WRAP53Q9BUR4 548 aaKnown RBP21.65■■□□□ 1.06
PTPN13-205ENST00000502971 SEMA4BQ9NPR2 832 aaPredicted RBP21.65■■□□□ 1.06
PTPN13-205ENST00000502971 EPS15L1Q9UBC2 864 aa21.65■■□□□ 1.06
PTPN13-205ENST00000502971 CD207Q9UJ71 328 aa21.65■■□□□ 1.06
PTPN13-205ENST00000502971 TCF20Q9UGU0 1960 aaKnown RBP21.64■■□□□ 1.06
PTPN13-205ENST00000502971 E2F3O00716 465 aa21.64■■□□□ 1.06
PTPN13-205ENST00000502971 PPP6CO00743 305 aa21.64■■□□□ 1.06
PTPN13-205ENST00000502971 VCLP18206 1134 aa21.64■■□□□ 1.06
PTPN13-205ENST00000502971 COPAP53621 1224 aa21.64■■□□□ 1.06
PTPN13-205ENST00000502971 CREB5Q02930 508 aa21.64■■□□□ 1.06
PTPN13-205ENST00000502971 RIPK1Q13546 671 aa21.64■■□□□ 1.06
PTPN13-205ENST00000502971 ENPP2Q13822 863 aa21.64■■□□□ 1.06
PTPN13-205ENST00000502971 DET1Q7L5Y6 550 aa21.64■■□□□ 1.06
PTPN13-205ENST00000502971 MMAAQ8IVH4 418 aaKnown RBP21.64■■□□□ 1.06
PTPN13-205ENST00000502971 CACNA2D2Q9NY47 1150 aa21.64■■□□□ 1.06
PTPN13-205ENST00000502971 TSR3Q9UJK0 312 aaKnown RBP21.64■■□□□ 1.06
PTPN13-205ENST00000502971 ADAMTS6Q9UKP5 1117 aa21.64■■□□□ 1.06
PTPN13-205ENST00000502971 STON1Q9Y6Q2 735 aa21.64■■□□□ 1.06
PTPN13-205ENST00000502971 NUAK1O60285 661 aa21.63■■□□□ 1.05
PTPN13-205ENST00000502971 FTH1P02794 183 aa21.63■■□□□ 1.05
PTPN13-205ENST00000502971 MPC1LP0DKB6 136 aa21.63■■□□□ 1.05
PTPN13-205ENST00000502971 TNFRSF4P43489 277 aa21.63■■□□□ 1.05
PTPN13-205ENST00000502971 CDC16Q13042 620 aa21.63■■□□□ 1.05
PTPN13-205ENST00000502971 TTC31Q49AM3 519 aaPredicted RBP21.63■■□□□ 1.05
PTPN13-205ENST00000502971 DNAL1Q4LDG9 190 aa21.63■■□□□ 1.05
PTPN13-205ENST00000502971 CHSY3Q70JA7 882 aa21.63■■□□□ 1.05
PTPN13-205ENST00000502971 EFL1Q7Z2Z2 1120 aaKnown RBP21.63■■□□□ 1.05
PTPN13-205ENST00000502971 PARP9Q8IXQ6 854 aa21.63■■□□□ 1.05
PTPN13-205ENST00000502971 ARHGAP24Q8N264 748 aa21.63■■□□□ 1.05
PTPN13-205ENST00000502971 PELI3Q8N2H9 469 aa21.63■■□□□ 1.05
PTPN13-205ENST00000502971 C19orf60Q96EN9 201 aa21.63■■□□□ 1.05
PTPN13-205ENST00000502971 ACOX2Q99424 681 aa21.63■■□□□ 1.05
PTPN13-205ENST00000502971 EIF2B4Q9UI10 523 aaKnown RBP21.63■■□□□ 1.05
PTPN13-205ENST00000502971 PTBP2Q9UKA9 531 aaKnown RBP21.63■■□□□ 1.05
PTPN13-205ENST00000502971 DNAJC15Q9Y5T4 150 aa21.63■■□□□ 1.05
PTPN13-205ENST00000502971 ESRRBO95718 433 aa21.63■■□□□ 1.05
PTPN13-205ENST00000502971 FOSL2P15408 326 aa21.63■■□□□ 1.05
PTPN13-205ENST00000502971 FBXO48Q5FWF7 155 aa21.63■■□□□ 1.05
PTPN13-205ENST00000502971 CDKL4Q5MAI5 379 aa21.63■■□□□ 1.05
PTPN13-205ENST00000502971 SULT1C3Q6IMI6 304 aa21.63■■□□□ 1.05
PTPN13-205ENST00000502971 METTL2BQ6P1Q9 378 aaKnown RBP21.63■■□□□ 1.05
PTPN13-205ENST00000502971 RBM15BQ8NDT2 890 aaKnown RBP21.63■■□□□ 1.05
PTPN13-205ENST00000502971 CATSPER2Q96P56 530 aa21.63■■□□□ 1.05
PTPN13-205ENST00000502971 NUSAP1Q9BXS6 441 aaKnown RBP21.63■■□□□ 1.05
PTPN13-205ENST00000502971 MMADHCQ9H3L0 296 aaPredicted RBP21.63■■□□□ 1.05
PTPN13-205ENST00000502971 ZBTB26Q9HCK0 441 aa21.63■■□□□ 1.05
PTPN13-205ENST00000502971 GIPC1O14908 333 aa21.62■■□□□ 1.05
PTPN13-205ENST00000502971 SGTAO43765 313 aa21.62■■□□□ 1.05
PTPN13-205ENST00000502971 MTX2O75431 263 aa21.62■■□□□ 1.05
PTPN13-205ENST00000502971 CRCPO75575 148 aa21.62■■□□□ 1.05
PTPN13-205ENST00000502971 COX4I1P13073 169 aa21.62■■□□□ 1.05
PTPN13-205ENST00000502971 PIK3R1P27986 724 aa21.62■■□□□ 1.05
PTPN13-205ENST00000502971 PSMD8P48556 350 aa21.62■■□□□ 1.05
PTPN13-205ENST00000502971 PKNOX1P55347 436 aa21.62■■□□□ 1.05
PTPN13-205ENST00000502971 MXRA7P84157 204 aa21.62■■□□□ 1.05
PTPN13-205ENST00000502971 RBBP7Q16576 425 aa21.62■■□□□ 1.05
PTPN13-205ENST00000502971 NEK10Q6ZWH5 1172 aa21.62■■□□□ 1.05
PTPN13-205ENST00000502971 Q7L0L9 218 aa21.62■■□□□ 1.05
PTPN13-205ENST00000502971 NLRP8Q86W28 1048 aa21.62■■□□□ 1.05
PTPN13-205ENST00000502971 DEFB123Q8N688 67 aa21.62■■□□□ 1.05
PTPN13-205ENST00000502971 CSGALNACT1Q8TDX6 532 aa21.62■■□□□ 1.05
PTPN13-205ENST00000502971 TWIST2Q8WVJ9 160 aa21.62■■□□□ 1.05
PTPN13-205ENST00000502971 MCUR1Q96AQ8 359 aa21.62■■□□□ 1.05
PTPN13-205ENST00000502971 NUS1Q96E22 293 aa21.62■■□□□ 1.05
PTPN13-205ENST00000502971 ZNF382Q96SR6 550 aa21.62■■□□□ 1.05
PTPN13-205ENST00000502971 MBD1Q9UIS9 605 aaPredicted RBP21.62■■□□□ 1.05
PTPN13-205ENST00000502971 PIKFYVEQ9Y2I7 2098 aa21.61■■□□□ 1.05
PTPN13-205ENST00000502971 ANHXE9PGG2 379 aa21.61■■□□□ 1.05
PTPN13-205ENST00000502971 RECQL5O94762 991 aaPredicted RBP21.61■■□□□ 1.05
PTPN13-205ENST00000502971 C8GP07360 202 aa21.61■■□□□ 1.05
PTPN13-205ENST00000502971 ENO2P09104 434 aaPredicted RBP21.61■■□□□ 1.05
PTPN13-205ENST00000502971 THRAP10827 490 aa21.61■■□□□ 1.05
PTPN13-205ENST00000502971 C6P13671 934 aa21.61■■□□□ 1.05
PTPN13-205ENST00000502971 EZRP15311 586 aaKnown RBP21.61■■□□□ 1.05
PTPN13-205ENST00000502971 GALK1P51570 392 aa21.61■■□□□ 1.05
PTPN13-205ENST00000502971 KHDC1Q4VXA5 237 aaKnown RBP21.61■■□□□ 1.05
PTPN13-205ENST00000502971 TMEM198Q66K66 360 aa21.61■■□□□ 1.05
PTPN13-205ENST00000502971 PHYKPLQ8IUZ5 450 aa21.61■■□□□ 1.05
PTPN13-205ENST00000502971 POU5F2Q8N7G0 328 aa21.61■■□□□ 1.05
PTPN13-205ENST00000502971 UBTD2Q8WUN7 234 aa21.61■■□□□ 1.05
PTPN13-205ENST00000502971 FBRSL1Q9HCM7 1045 aaKnown RBP21.61■■□□□ 1.05
PTPN13-205ENST00000502971 SLC16A5O15375 505 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms