RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 SSU72P8A0A1W2PR75 194 aa14.34□□□□□ -0.11
TRAF4-212ENST00000498540 WIPF3A6NGB9 483 aa14.34□□□□□ -0.11
TRAF4-212ENST00000498540 OR2AG2A6NM03 316 aa14.34□□□□□ -0.11
TRAF4-212ENST00000498540 POP7O75817 140 aaKnown RBP14.34□□□□□ -0.11
TRAF4-212ENST00000498540 PROSCO94903 275 aa14.34□□□□□ -0.11
TRAF4-212ENST00000498540 ZBTB11O95625 1053 aaPredicted RBP14.34□□□□□ -0.11
TRAF4-212ENST00000498540 NDST3O95803 873 aa14.34□□□□□ -0.11
TRAF4-212ENST00000498540 LDLRP01130 860 aa14.34□□□□□ -0.11
TRAF4-212ENST00000498540 MTHFD1P11586 935 aaKnown RBP14.34□□□□□ -0.11
TRAF4-212ENST00000498540 PBLDP30039 288 aaPredicted RBP14.34□□□□□ -0.11
TRAF4-212ENST00000498540 ARCN1P48444 511 aaKnown RBP14.34□□□□□ -0.11
TRAF4-212ENST00000498540 KPNA2P52292 529 aaKnown RBP14.34□□□□□ -0.11
TRAF4-212ENST00000498540 RAPSNQ13702 412 aa14.34□□□□□ -0.11
TRAF4-212ENST00000498540 NOMO1Q15155 1222 aa14.34□□□□□ -0.11
TRAF4-212ENST00000498540 NR6A1Q15406 480 aa14.34□□□□□ -0.11
TRAF4-212ENST00000498540 ANO6Q4KMQ2 910 aa14.34□□□□□ -0.11
TRAF4-212ENST00000498540 PLEKHS1Q5SXH7 462 aa14.34□□□□□ -0.11
TRAF4-212ENST00000498540 B4GALNT4Q76KP1 1039 aa14.34□□□□□ -0.11
TRAF4-212ENST00000498540 RHOT1Q8IXI2 618 aa14.34□□□□□ -0.11
TRAF4-212ENST00000498540 DSELQ8IZU8 1212 aa14.34□□□□□ -0.11
TRAF4-212ENST00000498540 OR8K5Q8NH50 307 aa14.34□□□□□ -0.11
TRAF4-212ENST00000498540 TTC25Q96NG3 672 aa14.34□□□□□ -0.11
TRAF4-212ENST00000498540 TLR10Q9BXR5 811 aa14.34□□□□□ -0.11
TRAF4-212ENST00000498540 IL26Q9NPH9 171 aa14.34□□□□□ -0.11
TRAF4-212ENST00000498540 LATS2Q9NRM7 1088 aa14.34□□□□□ -0.11
TRAF4-212ENST00000498540 TCFL5Q9UL49 500 aa14.34□□□□□ -0.11
TRAF4-212ENST00000498540 MEN1O00255 615 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 UGT1A9O60656 530 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 KCNJ13O60928 360 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 PMPCBO75439 489 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 LCA5LO95447 670 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 KLK3P07288 261 aaPredicted RBP14.33□□□□□ -0.12
TRAF4-212ENST00000498540 CAPN1P07384 714 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 RAB40ALP0C0E4 278 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 UGT1A6P19224 532 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 UGT1A1P22309 533 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 UGT1A4P22310 534 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 KDELR1P24390 212 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 RORAP35398 523 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 HMGCLP35914 325 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 VAV2P52735 878 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 GSDMDP57764 484 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 XRCC4Q13426 336 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 NFKBIBQ15653 356 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 SLC14A2Q15849 920 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 FIGNQ5HY92 759 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 ZFYVE27Q5T4F4 411 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 ALKBH5Q6P6C2 394 aaKnown RBP14.33□□□□□ -0.12
TRAF4-212ENST00000498540 FAM198BQ6UWH4 519 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 NPNTQ6UXI9 565 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 FAM151BQ6UXP7 276 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 OOSP2Q86WS3 158 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 ZBTB2Q8N680 514 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 BRSK1Q8TDC3 778 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 LRFN5Q96NI6 719 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 INSM2Q96T92 566 aaPredicted RBP14.33□□□□□ -0.12
TRAF4-212ENST00000498540 SMAD5Q99717 465 aaKnown RBP14.33□□□□□ -0.12
TRAF4-212ENST00000498540 NLNQ9BYT8 704 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 UGT1A7Q9HAW7 530 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 UGT1A10Q9HAW8 530 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 UGT1A8Q9HAW9 530 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 SOHLH2Q9NX45 425 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 GPR83Q9NYM4 423 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 UBP1Q9NZI7 540 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 BTRCQ9Y297 605 aa14.33□□□□□ -0.12
TRAF4-212ENST00000498540 BZW2Q9Y6E2 419 aaKnown RBP14.33□□□□□ -0.12
TRAF4-212ENST00000498540 PIKFYVEQ9Y2I7 2098 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 OR6C74A6NCV1 312 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 SERPING1P05155 500 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 ATP1A4Q13733 1029 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 NR1I3Q14994 352 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 TMTC4Q5T4D3 741 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 METRNLQ641Q3 311 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 SLC9A4Q6AI14 798 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 TMEM220Q6QAJ8 160 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 HPS6Q86YV9 775 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 BEND7Q8N7W2 519 aaPredicted RBP14.32□□□□□ -0.12
TRAF4-212ENST00000498540 GLIS1Q8NBF1 620 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 DDHD1Q8NEL9 900 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 SPDYE1Q8NFV5 336 aaPredicted RBP14.32□□□□□ -0.12
TRAF4-212ENST00000498540 NAT14Q8WUY8 206 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 CPT1BQ92523 772 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 SNRNP40Q96DI7 357 aaKnown RBP14.32□□□□□ -0.12
TRAF4-212ENST00000498540 CLIP3Q96DZ5 547 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 OLFM3Q96PB7 478 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 BPIFA3Q9BQP9 254 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 ZCCHC2Q9C0B9 1178 aaKnown RBP14.32□□□□□ -0.12
TRAF4-212ENST00000498540 XPO4Q9C0E2 1151 aaKnown RBP14.32□□□□□ -0.12
TRAF4-212ENST00000498540 WWP1Q9H0M0 922 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 GLOD4Q9HC38 313 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 PCMTD2Q9NV79 361 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 ASF1BQ9NVP2 202 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 CTTNBP2NLQ9P2B4 639 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 SLC24A2Q9UI40 661 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 NENFQ9UMX5 172 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 G3BP2Q9UN86 482 aaKnown RBP14.32□□□□□ -0.12
TRAF4-212ENST00000498540 FER1L5A0AVI2 2057 aa14.32□□□□□ -0.12
TRAF4-212ENST00000498540 LRRD1A4D1F6 860 aa14.31□□□□□ -0.12
TRAF4-212ENST00000498540 SLC9B1P1A6NJY1 282 aa14.31□□□□□ -0.12
TRAF4-212ENST00000498540 C3orf70A6NLC5 250 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms