RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 CRTC2Q53ET0 693 aaPredicted RBP11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 FNBP1LQ5T0N5 605 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 GPRC6AQ5T6X5 926 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 C16orf46Q6P387 395 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 PPP1R3BQ86XI6 285 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 CDKL3Q8IVW4 592 aaPredicted RBP11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 BEND7Q8N7W2 519 aaPredicted RBP11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 ZNF398Q8TD17 642 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 APOBEC4Q8WW27 367 aaKnown RBP11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 KLHL6Q8WZ60 621 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 UBXN4Q92575 508 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 LRRC45Q96CN5 670 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 ELMO2Q96JJ3 720 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 HS3ST6Q96QI5 342 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 FICDQ9BVA6 458 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 GBA3Q9H227 469 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 PDE7BQ9NP56 450 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 PSMD13Q9UNM6 376 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 EFR3BQ9Y2G0 817 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 AAR2Q9Y312 384 aaKnown RBP11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 ZNF106Q9H2Y7 1883 aaKnown RBP11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 C5orf60A6NFR6 353 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 GPR39O43194 453 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 KIF1CO43896 1103 aaKnown RBP11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 ZNF189O75820 626 aaPredicted RBP11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 KIAA0754O94854 1291 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 PRAMEF1O95521 474 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 CRTAMO95727 393 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 PYGMP11217 842 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 MTHFD1P11586 935 aaKnown RBP11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 FGF5P12034 268 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 ZNF28P17035 718 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 NELFEP18615 380 aaKnown RBP11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 CTNNA1P35221 906 aaKnown RBP11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 ARL4DP49703 201 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 NFE2L1Q14494 772 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 DEFB109BQ30KR1 87 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 ARMC6Q6NXE6 501 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 DET1Q7L5Y6 550 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 BPHLQ86WA6 291 aaPredicted RBP11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 SIDT2Q8NBJ9 832 aaKnown RBP11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 GALNT6Q8NCL4 622 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 C9orf43Q8TAL5 461 aaPredicted RBP11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 KRT35Q92764 455 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 DCUN1D1Q96GG9 259 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 PPP1R2P1Q96PQ5 205 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 IMP3Q9NV31 184 aaKnown RBP11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 LNPEPQ9UIQ6 1025 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 KCND3Q9UK17 655 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 CROTQ9UKG9 612 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 RARRES3Q9UL19 164 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 ACSL5Q9ULC5 683 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 TFR2Q9UP52 801 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 KCTD3Q9Y597 815 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 PCDHA3Q9Y5H8 950 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 ARL5AQ9Y689 179 aa11.51□□□□□ -0.57
NUDCD3-211ENST00000497978 SETXQ7Z333 2677 aaKnown RBP11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 UBA6A0AVT1 1052 aaPredicted RBP11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 MGAT4DA6NG13 374 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 GAPDHSO14556 408 aaPredicted RBP11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 KATNA1O75449 491 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 SPAG6O75602 509 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 SRP72O76094 671 aaKnown RBP11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 SLC35G4P0C7Q5 338 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 RALBP11234 206 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 OAS2P29728 719 aaKnown RBP11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 EIF3EP60228 445 aaKnown RBP11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 OTUD4Q01804 1114 aaKnown RBP11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 ACY1Q03154 408 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 TUBB3Q13509 450 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 PTPRCAPQ14761 206 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 DNTTIP2Q5QJE6 756 aaKnown RBP11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 ANKRD20A2Q5SQ80 823 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 ANKRD20A1Q5TYW2 823 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 ANKRD20A3Q5VUR7 823 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 METRNLQ641Q3 311 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 DARS2Q6PI48 645 aaKnown RBP11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 RANBP10Q6VN20 620 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 FAM83HQ6ZRV2 1179 aaPredicted RBP11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 PACS2Q86VP3 889 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 PTRH1Q86Y79 214 aaKnown RBP11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 KMT5CQ86Y97 462 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 OR4K2Q8NGD2 314 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 GPR150Q8NGU9 434 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 OR2L2Q8NH16 312 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 ACTL9Q8TC94 416 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 ZFPM2Q8WW38 1151 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 ULK4Q96C45 1275 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 C12orf66Q96MD2 445 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 FCRL4Q96PJ5 515 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 PANX2Q96RD6 677 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 CD180Q99467 661 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 OSBPL8Q9BZF1 889 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 WWP1Q9H0M0 922 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 ASB8Q9H765 288 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 C10orf88Q9H8K7 445 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 SEMA5BQ9P283 1151 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 CRLS1Q9UJA2 301 aa11.5□□□□□ -0.57
NUDCD3-211ENST00000497978 PADI1Q9ULC6 663 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms