RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 CA5AP35218 305 aa15.05■□□□□ -0
NUP50-219ENST00000497960 DRG2P55039 364 aaKnown RBP15.05■□□□□ -0
NUP50-219ENST00000497960 DMPKQ09013 629 aa15.05■□□□□ -0
NUP50-219ENST00000497960 GPS1Q13098 491 aa15.05■□□□□ -0
NUP50-219ENST00000497960 CLN3Q13286 438 aa15.05■□□□□ -0
NUP50-219ENST00000497960 SEMA5AQ13591 1074 aa15.05■□□□□ -0
NUP50-219ENST00000497960 SEPT6Q14141 434 aa15.05■□□□□ -0
NUP50-219ENST00000497960 DHX34Q14147 1143 aaKnown RBP15.05■□□□□ -0
NUP50-219ENST00000497960 SNAP47Q5SQN1 464 aa15.05■□□□□ -0
NUP50-219ENST00000497960 FNBP1LQ5T0N5 605 aa15.05■□□□□ -0
NUP50-219ENST00000497960 DET1Q7L5Y6 550 aa15.05■□□□□ -0
NUP50-219ENST00000497960 ZNF572Q7Z3I7 529 aaPredicted RBP15.05■□□□□ -0
NUP50-219ENST00000497960 PLXDC1Q8IUK5 500 aa15.05■□□□□ -0
NUP50-219ENST00000497960 RBM12BQ8IXT5 1001 aaKnown RBP15.05■□□□□ -0
NUP50-219ENST00000497960 HEXDCQ8WVB3 486 aa15.05■□□□□ -0
NUP50-219ENST00000497960 TAAR9Q96RI9 348 aa15.05■□□□□ -0
NUP50-219ENST00000497960 TBC1D10AQ9BXI6 508 aa15.05■□□□□ -0
NUP50-219ENST00000497960 ETNK1Q9HBU6 452 aa15.05■□□□□ -0
NUP50-219ENST00000497960 ZNF624Q9P2J8 865 aaPredicted RBP15.05■□□□□ -0
NUP50-219ENST00000497960 PDP2Q9P2J9 529 aa15.05■□□□□ -0
NUP50-219ENST00000497960 PCYOX1Q9UHG3 505 aa15.05■□□□□ -0
NUP50-219ENST00000497960 SLC30A1Q9Y6M5 507 aa15.05■□□□□ -0
NUP50-219ENST00000497960 KLHL33A6NCF5 533 aa15.04■□□□□ -0
NUP50-219ENST00000497960 OR52A4PA6NMU1 304 aa15.04■□□□□ -0
NUP50-219ENST00000497960 ERI2A8K979 691 aaKnown RBP15.04■□□□□ -0
NUP50-219ENST00000497960 A8MU76 341 aa15.04■□□□□ -0
NUP50-219ENST00000497960 CFAP99D6REC4 459 aa15.04■□□□□ -0
NUP50-219ENST00000497960 LDB2O43679 373 aa15.04■□□□□ -0
NUP50-219ENST00000497960 APRTP07741 180 aa15.04■□□□□ -0
NUP50-219ENST00000497960 BRAFP15056 766 aa15.04■□□□□ -0
NUP50-219ENST00000497960 AMD1P17707 334 aa15.04■□□□□ -0
NUP50-219ENST00000497960 PBLDP30039 288 aaPredicted RBP15.04■□□□□ -0
NUP50-219ENST00000497960 XIAPP98170 497 aa15.04■□□□□ -0
NUP50-219ENST00000497960 PTK6Q13882 451 aa15.04■□□□□ -0
NUP50-219ENST00000497960 PPP1R21Q6ZMI0 780 aa15.04■□□□□ -0
NUP50-219ENST00000497960 SYDE1Q6ZW31 735 aaPredicted RBP15.04■□□□□ -0
NUP50-219ENST00000497960 SNX20Q7Z614 316 aa15.04■□□□□ -0
NUP50-219ENST00000497960 FAM129CQ86XR2 697 aa15.04■□□□□ -0
NUP50-219ENST00000497960 MNS1Q8NEH6 495 aa15.04■□□□□ -0
NUP50-219ENST00000497960 SLCO2A1Q92959 643 aa15.04■□□□□ -0
NUP50-219ENST00000497960 SGF29Q96ES7 293 aa15.04■□□□□ -0
NUP50-219ENST00000497960 DNAJC1Q96KC8 554 aaKnown RBP15.04■□□□□ -0
NUP50-219ENST00000497960 UBL7Q96S82 380 aaPredicted RBP15.04■□□□□ -0
NUP50-219ENST00000497960 TRIM51Q9BSJ1 452 aa15.04■□□□□ -0
NUP50-219ENST00000497960 CPNE5Q9HCH3 593 aa15.04■□□□□ -0
NUP50-219ENST00000497960 PCDHB11Q9Y5F2 797 aa15.04■□□□□ -0
NUP50-219ENST00000497960 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.03■□□□□ -0
NUP50-219ENST00000497960 TEX51A0A1B0GUA7 166 aa15.03■□□□□ -0
NUP50-219ENST00000497960 MGAT4DA6NG13 374 aa15.03■□□□□ -0
NUP50-219ENST00000497960 EFCAB7A8K855 629 aa15.03■□□□□ -0
NUP50-219ENST00000497960 C9orf172C9J069 976 aa15.03■□□□□ -0
NUP50-219ENST00000497960 TTI1O43156 1089 aa15.03■□□□□ -0
NUP50-219ENST00000497960 UBXN7O94888 489 aa15.03■□□□□ -0
NUP50-219ENST00000497960 LIPCP11150 499 aa15.03■□□□□ -0
NUP50-219ENST00000497960 FGF3P11487 239 aaPredicted RBP15.03■□□□□ -0
NUP50-219ENST00000497960 MC4RP32245 332 aa15.03■□□□□ -0
NUP50-219ENST00000497960 VAC14Q08AM6 782 aa15.03■□□□□ -0
NUP50-219ENST00000497960 NFE2L1Q14494 772 aa15.03■□□□□ -0
NUP50-219ENST00000497960 POU6F1Q14863 301 aa15.03■□□□□ -0
NUP50-219ENST00000497960 CLCA4Q14CN2 919 aa15.03■□□□□ -0
NUP50-219ENST00000497960 GPR33Q49SQ1 333 aa15.03■□□□□ -0
NUP50-219ENST00000497960 BCL7AQ4VC05 210 aa15.03■□□□□ -0
NUP50-219ENST00000497960 ZRANB3Q5FWF4 1079 aa15.03■□□□□ -0
NUP50-219ENST00000497960 ARHGAP40Q5TG30 622 aa15.03■□□□□ -0
NUP50-219ENST00000497960 CCDC81Q6ZN84 652 aa15.03■□□□□ -0
NUP50-219ENST00000497960 ARHGAP22Q7Z5H3 698 aa15.03■□□□□ -0
NUP50-219ENST00000497960 NXPE1Q8N323 547 aa15.03■□□□□ -0
NUP50-219ENST00000497960 BEND7Q8N7W2 519 aaPredicted RBP15.03■□□□□ -0
NUP50-219ENST00000497960 DNAAF3Q8N9W5 541 aa15.03■□□□□ -0
NUP50-219ENST00000497960 STYXQ8WUJ0 223 aa15.03■□□□□ -0
NUP50-219ENST00000497960 ART4Q93070 314 aa15.03■□□□□ -0
NUP50-219ENST00000497960 CCNL2Q96S94 520 aaPredicted RBP15.03■□□□□ -0
NUP50-219ENST00000497960 COPS8Q99627 209 aa15.03■□□□□ -0
NUP50-219ENST00000497960 SLC40A1Q9NP59 571 aa15.03■□□□□ -0
NUP50-219ENST00000497960 EIF2B3Q9NR50 452 aaKnown RBP15.03■□□□□ -0
NUP50-219ENST00000497960 PIH1D1Q9NWS0 290 aaKnown RBP15.03■□□□□ -0
NUP50-219ENST00000497960 SLC39A1Q9NY26 324 aa15.03■□□□□ -0
NUP50-219ENST00000497960 FOXJ2Q9P0K8 574 aa15.03■□□□□ -0
NUP50-219ENST00000497960 KLHL3Q9UH77 587 aa15.03■□□□□ -0
NUP50-219ENST00000497960 WDR37Q9Y2I8 494 aa15.03■□□□□ -0
NUP50-219ENST00000497960 PCDHGA3Q9Y5H0 932 aa15.03■□□□□ -0
NUP50-219ENST00000497960 ZNF106Q9H2Y7 1883 aaKnown RBP15.03■□□□□ -0
NUP50-219ENST00000497960 LAMA5O15230 3695 aa15.02■□□□□ -0
NUP50-219ENST00000497960 CTAGE15A4D2H0 777 aa15.02■□□□□ -0
NUP50-219ENST00000497960 EIF4E1BA6NMX2 242 aaKnown RBP15.02■□□□□ -0
NUP50-219ENST00000497960 AGAP14A8MT82 685 aa15.02■□□□□ -0
NUP50-219ENST00000497960 B4E171 279 aa15.02■□□□□ -0
NUP50-219ENST00000497960 CCL22O00626 93 aa15.02■□□□□ -0
NUP50-219ENST00000497960 CTAGE8P0CG41 777 aa15.02■□□□□ -0
NUP50-219ENST00000497960 TYRP1P17643 537 aa15.02■□□□□ -0
NUP50-219ENST00000497960 TSPAN7P41732 249 aa15.02■□□□□ -0
NUP50-219ENST00000497960 PTGIRP43119 386 aa15.02■□□□□ -0
NUP50-219ENST00000497960 RAB15P59190 212 aa15.02■□□□□ -0
NUP50-219ENST00000497960 CDH17Q12864 832 aa15.02■□□□□ -0
NUP50-219ENST00000497960 LAMB3Q13751 1172 aa15.02■□□□□ -0
NUP50-219ENST00000497960 SKIDA1Q1XH10 827 aa15.02■□□□□ -0
NUP50-219ENST00000497960 SOWAHCQ53LP3 525 aaPredicted RBP15.02■□□□□ -0
NUP50-219ENST00000497960 METRNLQ641Q3 311 aa15.02■□□□□ -0
NUP50-219ENST00000497960 C8orf74Q6P047 294 aa15.02■□□□□ -0
NUP50-219ENST00000497960 FAM83HQ6ZRV2 1179 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms