RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 XKR5Q6UX68 686 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 LRIG3Q6UXM1 1119 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 WASH2PQ6VEQ5 465 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 SNX20Q7Z614 316 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 CROCCP2Q86T23 111 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 ZNF761Q86XN6 746 aaPredicted RBP15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 TRAPPC5Q8IUR0 188 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 LSMEM2Q8N112 164 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 GOLGA6L1Q8N7Z2 621 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 WDR36Q8NI36 951 aaKnown RBP15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 SNIP1Q8TAD8 396 aaKnown RBP15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 STYXQ8WUJ0 223 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 NAT14Q8WUY8 206 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 FGF11Q92914 225 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 SGF29Q96ES7 293 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 CDKN2AIPNLQ96HQ2 116 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 TTC25Q96NG3 672 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 TMEM74Q96NL1 305 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 SLC46A1Q96NT5 459 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 RUFY1Q96T51 708 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 TXLNGYQ9BZA5 131 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 ZCCHC2Q9C0B9 1178 aaKnown RBP15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 SEMA6CQ9H3T2 930 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 OSGEPL1Q9H4B0 414 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 FAM96AQ9H5X1 160 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 WASH6PQ9NQA3 447 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 ZNF624Q9P2J8 865 aaPredicted RBP15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 CPNE7Q9UBL6 633 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 DNAJC16Q9Y2G8 782 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 A0A087WV48 116 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 CCDC187A0A096LP49 1063 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 OR2AG2A6NM03 316 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 TMX2-CTNND1H3BSU7 103 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 KCNJ13O60928 360 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 XRCC1P18887 633 aaPredicted RBP15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 MSH3P20585 1137 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 MC4RP32245 332 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 SLC19A1P41440 591 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 MAGEA6P43360 314 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 ARSDP51689 593 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 PMS2P54278 862 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 EIF3BP55884 814 aaKnown RBP15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 CDK16Q00536 496 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 CBLBQ13191 982 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 BIRC2Q13490 618 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 HSP90B2PQ58FF3 399 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 AGAP9Q5VTM2 703 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 FAM83HQ6ZRV2 1179 aaPredicted RBP15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 SLC9B2Q86UD5 537 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 PIM3Q86V86 326 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 AMZ2Q86W34 360 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 NXPE1Q8N323 547 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 ZNF578Q96N58 590 aaPredicted RBP15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 MED4Q9NPJ6 270 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 KCNK4Q9NYG8 393 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 WDR37Q9Y2I8 494 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 MYLKQ15746 1914 aa15.68■□□□□ 0.1
CTDSP1-214ENST00000497677 SCN8AQ9UQD0 1980 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 IGLV3-16A0A075B6K0 115 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 IGHV5-10-1A0A0J9YXX1 117 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 TP73O15350 636 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 APRTP07741 180 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 PRSS56P0CW18 603 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 SLC2A4P14672 509 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 ITGALP20701 1170 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 IDSP22304 550 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 RPL10P27635 214 aaKnown RBP15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 CSF2RBP32927 897 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 EIF2S3P41091 472 aaKnown RBP15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 ERVPABLB-1P60509 514 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 GPLD1P80108 840 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 SARNPP82979 210 aaKnown RBP15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 SEPT6Q14141 434 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 CLCA4Q14CN2 919 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 GPR33Q49SQ1 333 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 BCL7AQ4VC05 210 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 CCDC38Q502W7 563 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 FNBP1LQ5T0N5 605 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 DET1Q7L5Y6 550 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 RAB11FIP2Q7L804 512 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 PIANPQ8IYJ0 282 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 BEND7Q8N7W2 519 aaPredicted RBP15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 DNAAF3Q8N9W5 541 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 OR13J1Q8NGT2 312 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 ULK4Q96C45 1275 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 ZNF514Q96K75 400 aaPredicted RBP15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 LINC00615Q96LM1 132 aaPredicted RBP15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 ZNF778Q96MU6 729 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 RANBP9Q96S59 729 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 SLC38A3Q99624 504 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 EIF2B3Q9NR50 452 aaKnown RBP15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 OGFRQ9NZT2 677 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 PDP2Q9P2J9 529 aa15.67■□□□□ 0.1
CTDSP1-214ENST00000497677 LAMA5O15230 3695 aa15.66■□□□□ 0.1
CTDSP1-214ENST00000497677 UNC13CQ8NB66 2214 aa15.66■□□□□ 0.1
CTDSP1-214ENST00000497677 PKD1L2Q7Z442 2459 aa15.66■□□□□ 0.1
CTDSP1-214ENST00000497677 PRAMEF33A0A0G2JMD5 474 aa15.66■□□□□ 0.1
CTDSP1-214ENST00000497677 CCDC78A2IDD5 438 aa15.66■□□□□ 0.1
CTDSP1-214ENST00000497677 CDRT15L2A8MXV6 281 aa15.66■□□□□ 0.1
CTDSP1-214ENST00000497677 E7EVH7 732 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms