RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 TIPRLO75663 272 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 GUCA1CO95843 209 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 CLPTM1O96005 669 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 GPIP06744 558 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 SPATA31D3P0C874 917 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 BPIP17213 487 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 ITGB6P18564 788 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 CASP2P42575 452 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 EMX2Q04743 252 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 NR6A1Q15406 480 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 SULT1C3Q6IMI6 304 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 METTL2BQ6P1Q9 378 aaKnown RBP10.91□□□□□ -0.66
CMSS1-208ENST00000496116 MACC1Q6ZN28 852 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 SPATA31D4Q6ZUB0 917 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 GAREM2Q75VX8 874 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 MILR1Q7Z6M3 343 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 AMIGO2Q86SJ2 522 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 BBS7Q8IWZ6 715 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 PROKR1Q8TCW9 393 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 TMEM125Q96AQ2 219 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 LYSMD1Q96S90 227 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 KCTD14Q9BQ13 255 aaPredicted RBP10.91□□□□□ -0.66
CMSS1-208ENST00000496116 MRPS26Q9BYN8 205 aaKnown RBP10.91□□□□□ -0.66
CMSS1-208ENST00000496116 TNKS2Q9H2K2 1166 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 HEBP1Q9NRV9 189 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 TMEM39AQ9NV64 488 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 PTBP2Q9UKA9 531 aaKnown RBP10.91□□□□□ -0.66
CMSS1-208ENST00000496116 TBX21Q9UL17 535 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 SCN8AQ9UQD0 1980 aa10.91□□□□□ -0.66
CMSS1-208ENST00000496116 OR7A17O14581 309 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 ARPC2O15144 300 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 FCGR1AP12314 374 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 CCL5P13501 91 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 FASP25445 335 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 GKP32189 559 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 CD70P32970 193 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 NSG1P42857 185 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 RPL5P46777 297 aaKnown RBP10.9□□□□□ -0.66
CMSS1-208ENST00000496116 ZFP36L2P47974 494 aaKnown RBP10.9□□□□□ -0.66
CMSS1-208ENST00000496116 SH3BGRP55822 239 aaPredicted RBP10.9□□□□□ -0.66
CMSS1-208ENST00000496116 POLE2P56282 527 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 EEFSECP57772 596 aaKnown RBP10.9□□□□□ -0.66
CMSS1-208ENST00000496116 MAD2L1Q13257 205 aaPredicted RBP10.9□□□□□ -0.66
CMSS1-208ENST00000496116 CDKN3Q16667 212 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 TIGD2Q4W5G0 525 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 PAGE3Q5JUK9 113 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 HMBOX1Q6NT76 420 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 TMCO2Q7Z6W1 182 aaPredicted RBP10.9□□□□□ -0.66
CMSS1-208ENST00000496116 ZFAND4Q86XD8 727 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 PTRH1Q86Y79 214 aaKnown RBP10.9□□□□□ -0.66
CMSS1-208ENST00000496116 NXPE1Q8N323 547 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 ELMOD1Q8N336 334 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 SFRP1Q8N474 314 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 CLDN19Q8N6F1 224 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 PACRGLQ8N7B6 248 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 ASIC4Q96FT7 647 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 SLC45A3Q96JT2 553 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 PPP3R2Q96LZ3 170 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 CIB1Q99828 191 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 C17orf80Q9BSJ5 609 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 APOL5Q9BWW9 433 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 EPB41L1Q9H4G0 881 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 NSUN3Q9H649 340 aaKnown RBP10.9□□□□□ -0.66
CMSS1-208ENST00000496116 PIDD1Q9HB75 910 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 WWOXQ9NZC7 414 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 OPTCQ9UBM4 332 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 ST14Q9Y5Y6 855 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 PRSS21Q9Y6M0 314 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 DENND4CQ5VZ89 1909 aa10.9□□□□□ -0.66
CMSS1-208ENST00000496116 LSM1O15116 133 aaKnown RBP10.9□□□□□ -0.67
CMSS1-208ENST00000496116 TGM5O43548 720 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 KATNA1O75449 491 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 CNPP09543 421 aaKnown RBP10.9□□□□□ -0.67
CMSS1-208ENST00000496116 UMPSP11172 480 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 UGT1A6P19224 532 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 UGT1A1P22309 533 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 UGT1A4P22310 534 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 UGT1A3P35503 534 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 UGT1A5P35504 534 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 GRIA2P42262 883 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 HSPA7P48741 367 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 GSK3BP49841 420 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 DEFB103AP81534 67 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 TXNL4AP83876 142 aaKnown RBP10.9□□□□□ -0.67
CMSS1-208ENST00000496116 MYBPC1Q00872 1141 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 LIPEQ05469 1076 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 CHRNA6Q15825 494 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 C18orf21Q32NC0 220 aaPredicted RBP10.9□□□□□ -0.67
CMSS1-208ENST00000496116 CNPY1Q3B7I2 92 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 FUT11Q495W5 492 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 C1orf53Q5VUE5 145 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 PPP4R4Q6NUP7 873 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 TPRG1Q6ZUI0 275 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 CCDC149Q6ZUS6 474 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 USP45Q70EL2 814 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 IFNEQ86WN2 208 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 GALNT15Q8N3T1 639 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 DPP10Q8N608 796 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 LKAAEAR1Q8TD35 194 aa10.9□□□□□ -0.67
CMSS1-208ENST00000496116 PRPF18Q99633 342 aaKnown RBP10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms