RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 SULT1C3Q6IMI6 304 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 ZFP1Q6P2D0 407 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 TMEM207Q6UWW9 146 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 MACC1Q6ZN28 852 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 RIPOR1Q6ZS17 1223 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 GPRIN3Q6ZVF9 776 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 Q6ZVU0 165 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 GRASPQ7Z6J2 395 aaPredicted RBP6.83□□□□□ -1.32
USP39-219ENST00000496047 DSG4Q86SJ6 1040 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 YAF2Q8IY57 180 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 RAVER1Q8IY67 606 aaKnown RBP6.83□□□□□ -1.32
USP39-219ENST00000496047 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.83□□□□□ -1.32
USP39-219ENST00000496047 FAM9CQ8IZT9 166 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 SIX5Q8N196 739 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 MIER2Q8N344 545 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 FBXW8Q8N3Y1 598 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 CATSPER1Q8NEC5 780 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 GRIN3AQ8TCU5 1115 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 MAPK15Q8TD08 544 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 TRPC4APQ8TEL6 797 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 ZNF483Q8TF39 744 aaPredicted RBP6.83□□□□□ -1.32
USP39-219ENST00000496047 OSCP1Q8WVF1 389 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 OR8D1Q8WZ84 308 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 FUBP1Q96AE4 644 aaKnown RBP6.83□□□□□ -1.32
USP39-219ENST00000496047 FAM136AQ96C01 138 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 ECHDC3Q96DC8 303 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 TCEAL4Q96EI5 215 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 HIST1H2AHQ96KK5 128 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 KLHL32Q96NJ5 620 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 BIRC8Q96P09 236 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 MCCC1Q96RQ3 725 aaPredicted RBP6.83□□□□□ -1.32
USP39-219ENST00000496047 HIST1H2AJQ99878 128 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 C17orf80Q9BSJ5 609 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 H2AFJQ9BTM1 129 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 HGH1Q9BTY7 390 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 ZSCAN5AQ9BUG6 496 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 SPATA16Q9BXB7 569 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 SMG9Q9H0W8 520 aaKnown RBP6.83□□□□□ -1.32
USP39-219ENST00000496047 VCXQ9H320 206 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 DENND2DQ9H6A0 471 aaPredicted RBP6.83□□□□□ -1.32
USP39-219ENST00000496047 WDR55Q9H6Y2 383 aaPredicted RBP6.83□□□□□ -1.32
USP39-219ENST00000496047 EBF2Q9HAK2 575 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 LATS2Q9NRM7 1088 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 TMEM45AQ9NWC5 275 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 GID8Q9NWU2 228 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 OBP2AQ9NY56 170 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 UTP6Q9NYH9 597 aaKnown RBP6.83□□□□□ -1.32
USP39-219ENST00000496047 CXXC1Q9P0U4 656 aaPredicted RBP6.83□□□□□ -1.32
USP39-219ENST00000496047 STX18Q9P2W9 335 aaKnown RBP6.83□□□□□ -1.32
USP39-219ENST00000496047 OPTCQ9UBM4 332 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 CDH22Q9UJ99 828 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 PLA2G4CQ9UP65 541 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 C15orf41Q9Y2V0 281 aa6.83□□□□□ -1.32
USP39-219ENST00000496047 COPG1Q9Y678 874 aaKnown RBP6.83□□□□□ -1.32
USP39-219ENST00000496047 MYO9BQ13459 2157 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 DNAH12Q6ZR08 3092 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 C15orf38-AP3S2A0A0A6YYH1 394 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 LOC100653049A0A140TA62 436 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 NPIPB15A6NHN6 443 aaPredicted RBP6.82□□□□□ -1.32
USP39-219ENST00000496047 NCF1BA6NI72 391 aaPredicted RBP6.82□□□□□ -1.32
USP39-219ENST00000496047 NCF1CA8MVU1 366 aaPredicted RBP6.82□□□□□ -1.32
USP39-219ENST00000496047 C1QTNF3-AMACRE9PGA6 284 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 PSMD11O00231 422 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 NVLO15381 856 aaKnown RBP6.82□□□□□ -1.32
USP39-219ENST00000496047 FFAR2O15552 330 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 HOXC11O43248 304 aaPredicted RBP6.82□□□□□ -1.32
USP39-219ENST00000496047 KRT34O76011 436 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 SLC25A14O95258 325 aaPredicted RBP6.82□□□□□ -1.32
USP39-219ENST00000496047 ANP32DO95626 131 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 ESRRBO95718 433 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 ELFN1P0C7U0 828 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 PRSS56P0CW18 603 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 MPC1LP0DKB6 136 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 NCF1P14598 390 aaPredicted RBP6.82□□□□□ -1.32
USP39-219ENST00000496047 CEBPBP17676 345 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 ITGAXP20702 1163 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 ME2P23368 584 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 CCR2P41597 374 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 CCR10P46092 362 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 CLCN7P51798 805 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 GTF2A1P52655 376 aaPredicted RBP6.82□□□□□ -1.32
USP39-219ENST00000496047 PGGT1BP53609 377 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 KCNK10P57789 538 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 SESN3P58005 492 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 ACTR3P61158 418 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 GRIK2Q13002 908 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 GTF2H3Q13889 308 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 FLOT2Q14254 428 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 PTK2BQ14289 1009 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 PDGFRLQ15198 375 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 PCBP2Q15366 365 aaKnown RBP eCLIP6.82□□□□□ -1.32
USP39-219ENST00000496047 TAF11Q15544 211 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 TGFBIQ15582 683 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 CHRNA6Q15825 494 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 IMPG1Q17R60 797 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 HSF5Q4G112 596 aaPredicted RBP6.82□□□□□ -1.32
USP39-219ENST00000496047 ATP6AP1LQ52LC2 224 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 FNDC3BQ53EP0 1204 aaKnown RBP6.82□□□□□ -1.32
USP39-219ENST00000496047 AGKQ53H12 422 aa6.82□□□□□ -1.32
USP39-219ENST00000496047 ZNF805Q5CZA5 627 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms