RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	OR14A16	Q8NHC5	309 aa		4.64	□□□□□ -1.67
CCDC66-222	ENST00000494672	SEPT8	Q92599	483 aa		4.64	□□□□□ -1.67
CCDC66-222	ENST00000494672	TMEM41A	Q96HV5	264 aa		4.64	□□□□□ -1.67
CCDC66-222	ENST00000494672	C7orf34	Q96L11	122 aa		4.64	□□□□□ -1.67
CCDC66-222	ENST00000494672	UBXN10	Q96LJ8	280 aa		4.64	□□□□□ -1.67
CCDC66-222	ENST00000494672	TSNARE1	Q96NA8	513 aa		4.64	□□□□□ -1.67
CCDC66-222	ENST00000494672	EYA3	Q99504	573 aa		4.64	□□□□□ -1.67
CCDC66-222	ENST00000494672	TREX2	Q9BQ50	279 aa	Predicted RBP	4.64	□□□□□ -1.67
CCDC66-222	ENST00000494672	FRMD8	Q9BZ67	464 aa	Predicted RBP	4.64	□□□□□ -1.67
CCDC66-222	ENST00000494672	TXLNGY	Q9BZA5	131 aa		4.64	□□□□□ -1.67
CCDC66-222	ENST00000494672	MRM3	Q9HC36	420 aa	Known RBP	4.64	□□□□□ -1.67
CCDC66-222	ENST00000494672	RPRD1B	Q9NQG5	326 aa	Known RBP	4.64	□□□□□ -1.67
CCDC66-222	ENST00000494672	DDX4	Q9NQI0	724 aa	Known RBP	4.64	□□□□□ -1.67
CCDC66-222	ENST00000494672	COX16	Q9P0S2	106 aa		4.64	□□□□□ -1.67
CCDC66-222	ENST00000494672	MDFIC	Q9P1T7	246 aa		4.64	□□□□□ -1.67
CCDC66-222	ENST00000494672	IFT80	Q9P2H3	777 aa	Predicted RBP	4.64	□□□□□ -1.67
CCDC66-222	ENST00000494672	STK38L	Q9Y2H1	464 aa		4.64	□□□□□ -1.67
CCDC66-222	ENST00000494672	FADS3	Q9Y5Q0	445 aa		4.64	□□□□□ -1.67
CCDC66-222	ENST00000494672	PTPRC	P08575	1304 aa		4.64	□□□□□ -1.67
CCDC66-222	ENST00000494672	FLT1	P17948	1338 aa		4.64	□□□□□ -1.67
CCDC66-222	ENST00000494672	ATXN2	Q99700	1313 aa	Known RBP	4.64	□□□□□ -1.67
CCDC66-222	ENST00000494672	MTUS2	Q5JR59	1369 aa		4.64	□□□□□ -1.67
CCDC66-222	ENST00000494672	GOLGA8Q	A0A0J9YX86	632 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	RGSL1	A5PLK6	1076 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	GOLGA8O	A6NCC3	632 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	FAM90A18P	A6NE21	464 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	FAM90A16P	A6NEW6	464 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	FAM90A9P	A6NNJ1	464 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	FAM90A5P	A8MXJ8	464 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	GOLGA8N	F8WBI6	632 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	DDX39A	O00148	427 aa	Known RBP	4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	PRPSAP2	O60256	369 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	CIDEA	O60543	219 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	PFDN1	O60925	122 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	LDB3	O75112	727 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	SEC22B	O75396	215 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	SLU7	O95391	586 aa	Known RBP	4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	STARD3NL	O95772	234 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	FAM90A15P	P0C7V4	464 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	FAM90A14P	P0C7W9	464 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	EIF2S2	P20042	333 aa	Known RBP	4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	M6PR	P20645	277 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	PRPH2	P23942	346 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	TTK	P33981	857 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	SERPINB6	P35237	376 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	CCR3	P51677	355 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	DRG2	P55039	364 aa	Known RBP	4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	TMPRSS3	P57727	454 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	PPARD	Q03181	441 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	FOXO1	Q12778	655 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	SMARCB1	Q12824	385 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	HNRNPD	Q14103	355 aa	Known RBP	4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	EFTUD2	Q15029	972 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	WHAMMP3	Q1A5X7	153 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	MDH1B	Q5I0G3	518 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	C8orf82	Q6P1X6	216 aa	Predicted RBP	4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	TMEM71	Q6P5X7	295 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	ERICH5	Q6P6B1	374 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	CYB5D1	Q6P9G0	228 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	SPSB3	Q6PJ21	355 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	CREB3L2	Q70SY1	520 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	OR8H3	Q8N146	312 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	ARHGAP18	Q8N392	663 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	CLIP4	Q8N3C7	705 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	PCYOX1L	Q8NBM8	494 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	CEP76	Q8TAP6	659 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	DQX1	Q8TE96	717 aa	Known RBP	4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	MAIP1	Q8WWC4	291 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	SEPT1	Q8WYJ6	367 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	STARD8	Q92502	1023 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	NR4A3	Q92570	626 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	RTP4	Q96DX8	246 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	TMA16	Q96EY4	203 aa	Known RBP	4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	PPP1R13B	Q96KQ4	1090 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	SGCZ	Q96LD1	299 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	CNOT6L	Q96LI5	555 aa	Known RBP	4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	APOLD1	Q96LR9	279 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	TRIM62	Q9BVG3	475 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	KLHL4	Q9C0H6	718 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	CCSER1	Q9C0I3	900 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	NDEL1	Q9GZM8	345 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	DPH5	Q9H2P9	285 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	TPK1	Q9H3S4	243 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	KLHL31	Q9H511	634 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	GORASP2	Q9H8Y8	452 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	NTN4	Q9HB63	628 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	PDE7B	Q9NP56	450 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	C12orf4	Q9NQ89	552 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	CNGB3	Q9NQW8	809 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	PAQR5	Q9NXK6	330 aa	Predicted RBP	4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	NDUFA13	Q9P0J0	144 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	HMG20B	Q9P0W2	317 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	ASIC3	Q9UHC3	531 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	SLC7A8	Q9UHI5	535 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	RCOR1	Q9UKL0	485 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	ANGPTL2	Q9UKU9	493 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	PSME2	Q9UL46	239 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	TRPV2	Q9Y5S1	764 aa		4.63	□□□□□ -1.67
CCDC66-222	ENST00000494672	CECR2	Q9BXF3	1484 aa		4.62	□□□□□ -1.67
CCDC66-222	ENST00000494672	ARHGEF37	A1IGU5	675 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms