RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	SEC14L1	Q92503	715 aa		13.37	□□□□□ -0.27
SAMM50-204	ENST00000493161	SYN2	Q92777	582 aa	Predicted RBP	13.37	□□□□□ -0.27
SAMM50-204	ENST00000493161	ZNF830	Q96NB3	372 aa	Predicted RBP	13.37	□□□□□ -0.27
SAMM50-204	ENST00000493161	INSM2	Q96T92	566 aa	Predicted RBP	13.37	□□□□□ -0.27
SAMM50-204	ENST00000493161	TUBB2B	Q9BVA1	445 aa		13.37	□□□□□ -0.27
SAMM50-204	ENST00000493161	GLOD4	Q9HC38	313 aa		13.37	□□□□□ -0.27
SAMM50-204	ENST00000493161	CBX8	Q9HC52	389 aa		13.37	□□□□□ -0.27
SAMM50-204	ENST00000493161	KCND1	Q9NSA2	647 aa		13.37	□□□□□ -0.27
SAMM50-204	ENST00000493161	IMP3	Q9NV31	184 aa	Known RBP	13.37	□□□□□ -0.27
SAMM50-204	ENST00000493161	CUEDC1	Q9NWM3	386 aa	Predicted RBP	13.37	□□□□□ -0.27
SAMM50-204	ENST00000493161	HRASLS2	Q9NWW9	162 aa		13.37	□□□□□ -0.27
SAMM50-204	ENST00000493161	MAP10	Q9P2G4	905 aa		13.37	□□□□□ -0.27
SAMM50-204	ENST00000493161	ZNF451	Q9Y4E5	1061 aa		13.37	□□□□□ -0.27
SAMM50-204	ENST00000493161	BZW2	Q9Y6E2	419 aa	Known RBP	13.37	□□□□□ -0.27
SAMM50-204	ENST00000493161	LRRD1	A4D1F6	860 aa		13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	OR6C74	A6NCV1	312 aa		13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	GAPDHS	O14556	408 aa	Predicted RBP	13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	TMEM63A	O94886	807 aa		13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	CAPN1	P07384	714 aa		13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	MTHFD1	P11586	935 aa	Known RBP	13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	HMGCL	P35914	325 aa		13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	DCT	P40126	519 aa		13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	CHRNA4	P43681	627 aa		13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	KPNA2	P52292	529 aa	Known RBP	13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	PDE1B	Q01064	536 aa		13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	ABR	Q12979	859 aa		13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	SLC9A4	Q6AI14	798 aa		13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	FAM151B	Q6UXP7	276 aa		13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	TTC25	Q96NG3	672 aa		13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	OLFM3	Q96PB7	478 aa		13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	NRTN	Q99748	197 aa		13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	BPIFA3	Q9BQP9	254 aa		13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	TLR10	Q9BXR5	811 aa		13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	NAT10	Q9H0A0	1025 aa	Known RBP	13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	WWP1	Q9H0M0	922 aa		13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	TMEM63C	Q9P1W3	806 aa		13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	ERRFI1	Q9UJM3	462 aa	Predicted RBP	13.36	□□□□□ -0.27
SAMM50-204	ENST00000493161	PRRC2C	Q9Y520	2896 aa	Known RBP	13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	CELSR2	Q9HCU4	2923 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161		A0A1W2PQJ5	194 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	SMTNL1	A8MU46	457 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161		F5H423	210 aa	Predicted RBP	13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	MEN1	O00255	615 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	CD68	P34810	354 aa	Predicted RBP	13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	RORA	P35398	523 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	PBX1	P40424	430 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	ESPL1	Q14674	2120 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	PTPRCAP	Q14761	206 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	GPRC6A	Q5T6X5	926 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	METRNL	Q641Q3	311 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	KLHL35	Q6PF15	583 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	DET1	Q7L5Y6	550 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	RHOT1	Q8IXI2	618 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	DSEL	Q8IZU8	1212 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	SLC25A41	Q8N5S1	370 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	ZBTB2	Q8N680	514 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	BRSK1	Q8TDC3	778 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	CD180	Q99467	661 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	SLAMF7	Q9NQ25	335 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	SAE1	Q9UBE0	346 aa	Predicted RBP	13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	FAM8A1	Q9UBU6	413 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	SLC24A2	Q9UI40	661 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	TCFL5	Q9UL49	500 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	SNX7	Q9UNH6	387 aa		13.35	□□□□□ -0.27
SAMM50-204	ENST00000493161	CRYBG3	Q68DQ2	2970 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	LOC285095	A0A1B0GVY8	99 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	WIPF3	A6NGB9	483 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	SLC9B1P1	A6NJY1	282 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	APOL1	O14791	398 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	DPM1	O60762	260 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	KCNJ13	O60928	360 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	ZBTB11	O95625	1053 aa	Predicted RBP	13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	DDAH2	O95865	285 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	SERPINC1	P01008	464 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	POLR2C	P19387	275 aa	Predicted RBP	13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	PTPN3	P26045	913 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	DYNLT1	P63172	113 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	XRCC4	Q13426	336 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	ATP1A4	Q13733	1029 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	MESD	Q14696	234 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	IQCB1	Q15051	598 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	PDK1	Q15118	436 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	NR6A1	Q15406	480 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	SLC14A2	Q15849	920 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	PTCHD3	Q3KNS1	767 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	PLEKHN1	Q494U1	663 aa	Predicted RBP	13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	TEX44	Q53QW1	395 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	ZNF789	Q5FWF6	425 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	SIRPB2	Q5JXA9	342 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	FNBP1L	Q5T0N5	605 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	CCDC70	Q6NSX1	233 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	KDELC1	Q6UW63	502 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	FAM198B	Q6UWH4	519 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	OOSP2	Q86WS3	158 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	LILRA3	Q8N6C8	439 aa	Predicted RBP	13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	DDHD1	Q8NEL9	900 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	OR1L3	Q8NH93	324 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	PNPLA2	Q96AD5	504 aa		13.34	□□□□□ -0.27
SAMM50-204	ENST00000493161	SNRNP40	Q96DI7	357 aa	Known RBP	13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms