RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 NDUFS1P28331 727 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 LEPRP48357 1165 aaKnown RBP12.2□□□□□ -0.46
COL6A1-205ENST00000492851 ARL4DP49703 201 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 SEPHS1P49903 392 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 EIF3EP60228 445 aaKnown RBP12.2□□□□□ -0.46
COL6A1-205ENST00000492851 CDC20Q12834 499 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 PLCL1Q15111 1095 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 ANKRD20A2Q5SQ80 823 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 FNBP1LQ5T0N5 605 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 FAM182AQ5T1J6 154 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 ANKRD20A1Q5TYW2 823 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 ANKRD20A3Q5VUR7 823 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 ARMC6Q6NXE6 501 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 ZNF449Q6P9G9 518 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 DARS2Q6PI48 645 aaKnown RBP12.2□□□□□ -0.46
COL6A1-205ENST00000492851 TTC13Q8NBP0 860 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 OR2L2Q8NH16 312 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 ACTL9Q8TC94 416 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 STARD8Q92502 1023 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 LINC00615Q96LM1 132 aaPredicted RBP12.2□□□□□ -0.46
COL6A1-205ENST00000492851 GOLPH3Q9H4A6 298 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 RARRES3Q9UL19 164 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 WDR37Q9Y2I8 494 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 HEBP2Q9Y5Z4 205 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 C17orf113A0A1B0GUU1 675 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 KCNN4O15554 427 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 MAP3K7O43318 606 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 SPAG6O75602 509 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 ZIC2O95409 532 aaPredicted RBP12.19□□□□□ -0.46
COL6A1-205ENST00000492851 RBP3P10745 1247 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 MTHFD1P11586 935 aaKnown RBP12.19□□□□□ -0.46
COL6A1-205ENST00000492851 DLSTP36957 453 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 OTUD4Q01804 1114 aaKnown RBP12.19□□□□□ -0.46
COL6A1-205ENST00000492851 KRT33BQ14525 404 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 GPR33Q49SQ1 333 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 BCL7AQ4VC05 210 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 TMTC4Q5T4D3 741 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 FAM92BQ6ZTR7 304 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 SIDT2Q8NBJ9 832 aaKnown RBP12.19□□□□□ -0.46
COL6A1-205ENST00000492851 OR4K2Q8NGD2 314 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 OR8K5Q8NH50 307 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 UBE2Q2Q8WVN8 375 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 RSC1A1Q92681 617 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 KRT35Q92764 455 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 MRFAP1L1Q96HT8 127 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 SLC41A2Q96JW4 573 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 FICDQ9BVA6 458 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 VPS37BQ9H9H4 285 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 ARNT2Q9HBZ2 717 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 HRASLS2Q9NWW9 162 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 ANAPC2Q9UJX6 822 aa12.19□□□□□ -0.46
COL6A1-205ENST00000492851 PIEZO2Q9H5I5 2752 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 AHCTF1Q8WYP5 2266 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 UBA6A0AVT1 1052 aaPredicted RBP12.18□□□□□ -0.46
COL6A1-205ENST00000492851 MACROD2A1Z1Q3 448 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 OR5K3A6NET4 321 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 AGAP14A8MT82 685 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 C21orf140B9A014 251 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 MATN2O00339 956 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 TERTO14746 1132 aaKnown RBP12.18□□□□□ -0.46
COL6A1-205ENST00000492851 PJA2O43164 708 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 PSMD3O43242 534 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 BUD23O43709 281 aaKnown RBP12.18□□□□□ -0.46
COL6A1-205ENST00000492851 KIAA0754O94854 1291 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 GSTM1P09488 218 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 SLC35G4P0C7Q5 338 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 PRKAR1AP10644 381 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 ITGALP20701 1170 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 ADRA1AP35348 466 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 MARCKSL1P49006 195 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 CTSCP53634 463 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 SH3BP2P78314 561 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 HSD11B2P80365 405 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 GSTM4Q03013 218 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 PRKAA1Q13131 559 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 NFE2L1Q14494 772 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 GSE1Q14687 1217 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 DNTTIP2Q5QJE6 756 aaKnown RBP12.18□□□□□ -0.46
COL6A1-205ENST00000492851 C16orf46Q6P387 395 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 OOSP2Q86WS3 158 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 UNC5BQ8IZJ1 945 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 SYCE1Q8N0S2 351 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 UBL4BQ8N7F7 174 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 GALNT6Q8NCL4 622 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 C9orf43Q8TAL5 461 aaPredicted RBP12.18□□□□□ -0.46
COL6A1-205ENST00000492851 SPATA13Q96N96 652 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 COPS8Q99627 209 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 GPR87Q9BY21 358 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 SYTL2Q9HCH5 934 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 IMP3Q9NV31 184 aaKnown RBP12.18□□□□□ -0.46
COL6A1-205ENST00000492851 LNPEPQ9UIQ6 1025 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 CRLS1Q9UJA2 301 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 PSMD13Q9UNM6 376 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 PCDHGA6Q9Y5G7 932 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 ARL5AQ9Y689 179 aa12.18□□□□□ -0.46
COL6A1-205ENST00000492851 COL6A6A6NMZ7 2263 aa12.17□□□□□ -0.46
COL6A1-205ENST00000492851 TLCD2A6NGC4 264 aa12.17□□□□□ -0.46
COL6A1-205ENST00000492851 MIF4GDA9UHW6 222 aaKnown RBP12.17□□□□□ -0.46
COL6A1-205ENST00000492851 F5H423 210 aaPredicted RBP12.17□□□□□ -0.46
COL6A1-205ENST00000492851 GAPDHSO14556 408 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms