RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 CREB5Q02930 508 aa12.68□□□□□ -0.38
PRAME-213ENST00000492657 C6orf136Q5SQH8 315 aa12.68□□□□□ -0.38
PRAME-213ENST00000492657 TXNDC11Q6PKC3 985 aa12.68□□□□□ -0.38
PRAME-213ENST00000492657 SBSNQ6UWP8 590 aa12.68□□□□□ -0.38
PRAME-213ENST00000492657 SLC39A5Q6ZMH5 540 aa12.68□□□□□ -0.38
PRAME-213ENST00000492657 TSPAN33Q86UF1 283 aa12.68□□□□□ -0.38
PRAME-213ENST00000492657 TOP1MTQ969P6 601 aa12.68□□□□□ -0.38
PRAME-213ENST00000492657 TMEM74Q96NL1 305 aa12.68□□□□□ -0.38
PRAME-213ENST00000492657 DCUN1D5Q9BTE7 237 aa12.68□□□□□ -0.38
PRAME-213ENST00000492657 MRPS26Q9BYN8 205 aaKnown RBP12.68□□□□□ -0.38
PRAME-213ENST00000492657 CFAP97Q9P2B7 532 aa12.68□□□□□ -0.38
PRAME-213ENST00000492657 ZNF232Q9UNY5 417 aa12.68□□□□□ -0.38
PRAME-213ENST00000492657 SYNCRIPO60506 623 aaKnown RBP12.67□□□□□ -0.38
PRAME-213ENST00000492657 URODP06132 367 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 CKMP06732 381 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 CAPN1P07384 714 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 MTHFD1P11586 935 aaKnown RBP12.67□□□□□ -0.38
PRAME-213ENST00000492657 PSMC3P17980 439 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 STK19P49842 368 aaPredicted RBP12.67□□□□□ -0.38
PRAME-213ENST00000492657 CDH15P55291 814 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 LMAN2Q12907 356 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 NFYCQ13952 458 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 TIGD2Q4W5G0 525 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 AARS2Q5JTZ9 985 aaKnown RBP12.67□□□□□ -0.38
PRAME-213ENST00000492657 DGKKQ5KSL6 1271 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 OGFOD2Q6N063 350 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 ZNF783Q6ZMS7 281 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 RFLNAQ6ZTI6 216 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 FRA10AC1Q70Z53 315 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 GOLGA7Q7Z5G4 137 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 RBM12BQ8IXT5 1001 aaKnown RBP12.67□□□□□ -0.38
PRAME-213ENST00000492657 SFRP1Q8N474 314 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 MINDY1Q8N5J2 469 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 DCAF4L2Q8NA75 395 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 FNDC5Q8NAU1 212 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 OR2T34Q8NGX1 318 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 OR2T3Q8NH03 318 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 METTL6Q8TCB7 284 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 HOPXQ9BPY8 73 aaPredicted RBP12.67□□□□□ -0.38
PRAME-213ENST00000492657 CLPBQ9H078 707 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 EPB41L1Q9H4G0 881 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 ZFYVE1Q9HBF4 777 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 ELOVL2Q9NXB9 296 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 ABCD2Q9UBJ2 740 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 INTS6Q9UL03 887 aaKnown RBP12.67□□□□□ -0.38
PRAME-213ENST00000492657 CHD7Q9P2D1 2997 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 OR7A17O14581 309 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 GIPC1O14908 333 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 ZNF821O75541 412 aaPredicted RBP12.67□□□□□ -0.38
PRAME-213ENST00000492657 SLC22A3O75751 556 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 SLC25A14O95258 325 aaPredicted RBP12.67□□□□□ -0.38
PRAME-213ENST00000492657 CHEK2O96017 543 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 NCK1P16333 377 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 BPIP17213 487 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 HSPA13P48723 471 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 HSPA7P48741 367 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 PLIN5Q00G26 463 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 BCL2L1Q07817 233 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 CHRNA6Q15825 494 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 SPATA19Q7Z5L4 167 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 TCEAL8Q8IYN2 117 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 MYO1HQ8N1T3 1032 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 DIS3LQ8TF46 1054 aaKnown RBP12.67□□□□□ -0.38
PRAME-213ENST00000492657 APOL5Q9BWW9 433 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 RBM38Q9H0Z9 239 aaKnown RBP12.67□□□□□ -0.38
PRAME-213ENST00000492657 ZNF696Q9H7X3 374 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 MRPL17Q9NRX2 175 aaKnown RBP12.67□□□□□ -0.38
PRAME-213ENST00000492657 PCDHGA4Q9Y5G9 962 aa12.67□□□□□ -0.38
PRAME-213ENST00000492657 KIAA0100Q14667 2235 aaKnown RBP12.67□□□□□ -0.38
PRAME-213ENST00000492657 A0A1W2PP18 115 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 TYW5A2RUC4 315 aaKnown RBP12.66□□□□□ -0.38
PRAME-213ENST00000492657 SAC3D1A6NKF1 404 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 TRBC1P01850 177 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 CD9P21926 228 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 VEGFBP49765 207 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 KCNK10P57789 538 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 PHKG1Q16816 387 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 IL27RAQ6UWB1 636 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 REM2Q8IYK8 340 aaPredicted RBP12.66□□□□□ -0.38
PRAME-213ENST00000492657 OR4F6Q8NGB9 312 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 TMEM125Q96AQ2 219 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 PBXIP1Q96AQ6 731 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 NUSAP1Q9BXS6 441 aaKnown RBP12.66□□□□□ -0.38
PRAME-213ENST00000492657 PAK6Q9NQU5 681 aaPredicted RBP12.66□□□□□ -0.38
PRAME-213ENST00000492657 INTS7Q9NVH2 962 aaKnown RBP12.66□□□□□ -0.38
PRAME-213ENST00000492657 PCDHA9Q9Y5H5 950 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 TAPBPO15533 448 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 AKAP10O43572 662 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 VPS4BO75351 444 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 STAMBPO95630 424 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 HSPA8P11142 646 aaKnown RBP12.66□□□□□ -0.38
PRAME-213ENST00000492657 OXTRP30559 389 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 AP1S1P61966 158 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 NFATC2Q13469 925 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 CDKN3Q16667 212 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 RETSATQ6NUM9 610 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 SLC2A7Q6PXP3 512 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 ANKRD33Q7Z3H0 272 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 ZNF382Q96SR6 550 aa12.66□□□□□ -0.38
PRAME-213ENST00000492657 HERC2P3Q9BVR0 1158 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms