RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 ZNF572Q7Z3I7 529 aaPredicted RBP12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 GLT6D1Q7Z4J2 308 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 SLC9B2Q86UD5 537 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 LSM14AQ8ND56 463 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 AGBL5Q8NDL9 886 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 DDHD1Q8NEL9 900 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 OR10G6Q8NH81 332 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 NAT14Q8WUY8 206 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 NCSTNQ92542 709 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 ART4Q93070 314 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 TAAR9Q96RI9 348 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 CARD6Q9BX69 1037 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 SPRY4Q9C004 299 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 COL6A6A6NMZ7 2263 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 LILRA5A6NI73 299 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 OR5K4A6NMS3 321 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 OR52A4PA6NMU1 304 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 A8MU76 341 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 B4E171 279 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 ERVH48-1M5A8F1 160 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 TTI1O43156 1089 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 SGTAO43765 313 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 METTL18O95568 372 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 TSPAN7P41732 249 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 GFERP55789 205 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 XIAPP98170 497 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 RHDQ02161 417 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 SPARCL1Q14515 664 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 CLCA4Q14CN2 919 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 INSCQ1MX18 579 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 SNAP47Q5SQN1 464 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 ANKS6Q68DC2 871 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 C8orf74Q6P047 294 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 WASH2PQ6VEQ5 465 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 TMEM26Q6ZUK4 368 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 ZNF843Q8N446 348 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 GLIS1Q8NBF1 620 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 JPH3Q8WXH2 748 aaPredicted RBP12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 SH3KBP1Q96B97 665 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 DPYSL5Q9BPU6 564 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 UCK1Q9HA47 277 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 ETNK1Q9HBU6 452 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 SLC40A1Q9NP59 571 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 WASH6PQ9NQA3 447 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 SMOXQ9NWM0 555 aa12.46□□□□□ -0.41
SEC61A1-206ENST00000491668 MN1Q10571 1320 aaPredicted RBP12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 FAM187AA6NFU0 413 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 EFCAB7A8K855 629 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 PDZK1P1A8MUH7 402 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 POP7O75817 140 aaKnown RBP12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 APRTP07741 180 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 SLC2A4P14672 509 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 TYRP1P17643 537 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 CSTF2P33240 577 aaKnown RBP eCLIP12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 MAPK9P45984 424 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 DMPKQ09013 629 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 PTK6Q13882 451 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 LY6DQ14210 128 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 TAF1AQ15573 450 aaPredicted RBP12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 ZDHHC20Q5W0Z9 365 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 KCTD11Q693B1 232 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 PPP1R21Q6ZMI0 780 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 TRAPPC5Q8IUR0 188 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 BEND7Q8N7W2 519 aaPredicted RBP12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 OR4K2Q8NGD2 314 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 GDAP1Q8TB36 358 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 ZNF398Q8TD17 642 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 SLCO2A1Q92959 643 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 NKD1Q969G9 470 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 WBP1Q96G27 269 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 AHCYL2Q96HN2 611 aaKnown RBP12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 CTRCQ99895 268 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 DDA1Q9BW61 102 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 TRIM31Q9BZY9 425 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 LRRC40Q9H9A6 602 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 SIDT1Q9NXL6 827 aaKnown RBP12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 SLC39A1Q9NY26 324 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 AKAP7Q9P0M2 348 aaPredicted RBP12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 KLHL3Q9UH77 587 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 FKBPLQ9UIM3 349 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 UTP11Q9Y3A2 253 aaKnown RBP12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 PKP3Q9Y446 797 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 PCDHGA4Q9Y5G9 962 aa12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 SETXQ7Z333 2677 aaKnown RBP12.45□□□□□ -0.42
SEC61A1-206ENST00000491668 OR2AG2A6NM03 316 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 ERI2A8K979 691 aaKnown RBP12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 AGAP14A8MT82 685 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 EFCAB8A8MWE9 144 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 CCL22O00626 93 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 STX7O15400 261 aaKnown RBP12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 RAD51CO43502 376 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 LDB2O43679 373 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 PPFIA2O75334 1257 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 PRAMEF1O95521 474 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 AP2A1O95782 977 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 C9P02748 559 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 LPOP22079 712 aaPredicted RBP12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 IDSP22304 550 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 CD82P27701 267 aa12.44□□□□□ -0.42
SEC61A1-206ENST00000491668 PTGIRP43119 386 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms