RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 CD86P42081 329 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 DIO3P55073 304 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 FBXO43Q4G163 708 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 INTS6LQ5JSJ4 861 aaKnown RBP11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 DPY19L3Q6ZPD9 716 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 VASH1Q7L8A9 365 aaPredicted RBP11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 UBE2Q1Q7Z7E8 422 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 PHC2Q8IXK0 858 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 TMEM209Q96SK2 561 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 MKRN2Q9H000 416 aaKnown RBP11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 MED28Q9H204 178 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 CRISPLD1Q9H336 500 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 NXF3Q9H4D5 531 aaKnown RBP11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 ZNF487B1APH4 448 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 hCG_2039718K7EN88 272 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 ULK1O75385 1050 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 OR2B3O76000 313 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 AP2A2O94973 939 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 FABP3P05413 133 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 PSKH1P11801 424 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 AGXTP21549 392 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 PPP3CCP48454 512 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 RAB6CQ53S08 254 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 TOR1AIP2Q8NFQ8 470 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 PHF10Q8WUB8 498 aaKnown RBP11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 SLC13A3Q8WWT9 602 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 SIPA1Q96FS4 1042 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 PIWIL1Q96J94 861 aaKnown RBP11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 PGLYRP2Q96PD5 576 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 MRIQ9BWK5 157 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 RAB6CQ9H0N0 254 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 BAIAP2Q9UQB8 552 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 PCDHGB6Q9Y5F9 930 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 PLCH1Q4KWH8 1693 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 EIF3FO00303 357 aaPredicted RBP11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 RFXANKO14593 260 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 NPM3O75607 178 aaKnown RBP11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 MSL3P1P0C860 447 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 MYL9P24844 172 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 WNT7BP56706 349 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 CD300CQ08708 224 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 MAB21L1Q13394 359 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 OVOS1Q6IE37 1185 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 MZT2AQ6P582 158 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 NOTUMQ6P988 496 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 TAS1R3Q7RTX0 852 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 SPRED1Q7Z699 444 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 SPERTQ8NA61 448 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 B3GALNT2Q8NCR0 500 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 CHST13Q8NET6 341 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 CLEC4CQ8WTT0 213 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 RPL10LQ96L21 214 aaKnown RBP11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 SLC30A3Q99726 388 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 IL37Q9NZH6 218 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 ZIM2Q9NZV7 527 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 TJP1Q07157 1748 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 FAM220BPB1ANY3 271 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 ZNF197O14709 1029 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 PLD2O14939 933 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 CSF2P04141 144 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 USP17L7P0C7H9 530 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 JUNBP17275 347 aaPredicted RBP11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 CYP2B6P20813 491 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 AIF1P55008 147 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 MAMDC4Q6UXC1 1216 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 PTCHD4Q6ZW05 846 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 SLC44A2Q8IWA5 706 aaPredicted RBP11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 TMEM199Q8N511 208 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 LPCAT1Q8NF37 534 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 TMEM174Q8WUU8 243 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 NDRG1Q92597 394 aaKnown RBP11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 ITCHQ96J02 903 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 TIGARQ9NQ88 270 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 UGT2A1Q9Y4X1 527 aa11.15□□□□□ -0.62
CRNKL1-204ENST00000490910 AGAP5A6NIR3 686 aa11.15□□□□□ -0.63
CRNKL1-204ENST00000490910 OTCP00480 354 aa11.15□□□□□ -0.63
CRNKL1-204ENST00000490910 CAPN3P20807 821 aa11.15□□□□□ -0.63
CRNKL1-204ENST00000490910 CYP3A5P20815 502 aa11.15□□□□□ -0.63
CRNKL1-204ENST00000490910 NUMBP49757 651 aa11.15□□□□□ -0.63
CRNKL1-204ENST00000490910 RORCP51449 518 aa11.15□□□□□ -0.63
CRNKL1-204ENST00000490910 ACLYP53396 1101 aa11.15□□□□□ -0.63
CRNKL1-204ENST00000490910 OR4D2P58180 307 aa11.15□□□□□ -0.63
CRNKL1-204ENST00000490910 CLDN10P78369 228 aa11.15□□□□□ -0.63
CRNKL1-204ENST00000490910 GRB7Q14451 532 aa11.15□□□□□ -0.63
CRNKL1-204ENST00000490910 TAZQ16635 292 aa11.15□□□□□ -0.63
CRNKL1-204ENST00000490910 PTPRNQ16849 979 aa11.15□□□□□ -0.63
CRNKL1-204ENST00000490910 CES4AQ5XG92 561 aa11.15□□□□□ -0.63
CRNKL1-204ENST00000490910 LGI2Q8N0V4 545 aa11.15□□□□□ -0.63
CRNKL1-204ENST00000490910 Q96MT0 163 aa11.15□□□□□ -0.63
CRNKL1-204ENST00000490910 POLR3BQ9NW08 1133 aaPredicted RBP11.15□□□□□ -0.63
CRNKL1-204ENST00000490910 ERVK13-1Q9NX77 482 aa11.15□□□□□ -0.63
CRNKL1-204ENST00000490910 OPTCQ9UBM4 332 aa11.15□□□□□ -0.63
CRNKL1-204ENST00000490910 F8W810 466 aa11.14□□□□□ -0.63
CRNKL1-204ENST00000490910 ZNF195O14628 629 aa11.14□□□□□ -0.63
CRNKL1-204ENST00000490910 OR4F21O95013 312 aa11.14□□□□□ -0.63
CRNKL1-204ENST00000490910 IFNA16P05015 189 aa11.14□□□□□ -0.63
CRNKL1-204ENST00000490910 SERPINF2P08697 491 aa11.14□□□□□ -0.63
CRNKL1-204ENST00000490910 ARHGEF7Q14155 803 aa11.14□□□□□ -0.63
CRNKL1-204ENST00000490910 E2F2Q14209 437 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms