RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833		A0A087WXM4	84 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	GLYATL1P3	A0A0U1RQE8	302 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	RNF103-CHMP3	A0A140T963	221 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	DHRS12	A0PJE2	317 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	CCDC78	A2IDD5	438 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	C16orf96	A6NNT2	1141 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	AGAP14	A8MT82	685 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	MEI4	A8MW99	385 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	NPIPB8	E9PQR5	432 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833		H0YAE9	185 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833		K7EPI3	171 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	TXNDC9	O14530	226 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	ZNF197	O14709	1029 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	PIP5K1B	O14986	540 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	FFAR2	O15552	330 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	SYNCRIP	O60506	623 aa	Known RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	DEAF1	O75398	565 aa	Predicted RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	ERN1	O75460	977 aa	Known RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	SKAP2	O75563	359 aa	Predicted RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	ZMPSTE24	O75844	475 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	KCNH1	O95259	989 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	FKBP9	O95302	570 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	PRL	P01236	227 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	FTH1	P02794	183 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	POU2F2	P09086	479 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	MPC1L	P0DKB6	136 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	VSIG8	P0DPA2	414 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	TCF3	P15923	654 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	XRCC1	P18887	633 aa	Predicted RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	CYP2A7	P20853	494 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	PPIB	P23284	216 aa	Known RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	ACRV1	P26436	265 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	SLC6A4	P31645	630 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	GGT5	P36269	586 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	ABL2	P42684	1182 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	ABCG1	P45844	678 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	GNPDA1	P46926	289 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	GPR15	P49685	360 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	CLCN7	P51798	805 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	ARHGDIA	P52565	204 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	NME5	P56597	212 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	RAB15	P59190	212 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	RPS24	P62847	133 aa	Known RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	MRPS22	P82650	360 aa	Known RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	TXNL4A	P83876	142 aa	Known RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	UBE3A	Q05086	875 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	NFATC2	Q13469	925 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	NFYC	Q13952	458 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	CEACAM7	Q14002	265 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	SEMA3A	Q14563	771 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	ZNF460	Q14592	562 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	RBBP5	Q15291	538 aa	Known RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	IMPG1	Q17R60	797 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	GGTA1P	Q4G0N0	100 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	TMEM259	Q4ZIN3	620 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	XKR7	Q5GH72	579 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	PLEKHS1	Q5SXH7	462 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	SDHAF4	Q5VUM1	108 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	PDE12	Q6L8Q7	609 aa	Known RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	CXorf57	Q6NSI4	855 aa	Known RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	VASH1	Q7L8A9	365 aa	Predicted RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	ERMP1	Q7Z2K6	904 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	LRRC70	Q7Z2Q7	622 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	CTU1	Q7Z7A3	348 aa	Known RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	TICAM1	Q8IUC6	712 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	CFAP52	Q8N1V2	620 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	FIBCD1	Q8N539	461 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	NATD1	Q8N6N6	113 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	TRIML2	Q8N7C3	387 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	FNDC5	Q8NAU1	212 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	PAPD5	Q8NDF8	572 aa	Known RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	VPS37A	Q8NEZ2	397 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	MDGA1	Q8NFP4	955 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	OR7D4	Q8NG98	312 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	OR2AP1	Q8NGE2	309 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	OR13C4	Q8NGS5	318 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	ZFP28	Q8NHY6	868 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	FBXO27	Q8NI29	283 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	CD200R1	Q8TD46	325 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	MCOLN3	Q8TDD5	553 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	CSGALNACT1	Q8TDX6	532 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	LZIC	Q8WZA0	190 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	PTER	Q96BW5	349 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	ZNF689	Q96CS4	500 aa	Predicted RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	REPS1	Q96D71	796 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	LINGO1	Q96FE5	620 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	ZNF419	Q96HQ0	510 aa	Predicted RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	CNDP2	Q96KP4	475 aa	Known RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	MARK4	Q96L34	752 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	FOPNL	Q96NB1	174 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	COPS8	Q99627	209 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	PRPF18	Q99633	342 aa	Known RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	NPAS2	Q99743	824 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	KCTD14	Q9BQ13	255 aa	Predicted RBP	6.25	□□□□□ -1.41
FN1-223	ENST00000490833	SPATA9	Q9BWV2	254 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	EPHX3	Q9H6B9	360 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	ASB8	Q9H765	288 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	GORASP2	Q9H8Y8	452 aa		6.25	□□□□□ -1.41
FN1-223	ENST00000490833	CLK4	Q9HAZ1	481 aa	Known RBP	6.25	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms