RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 GPR39O43194 453 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 AQP9O43315 295 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 CA12O43570 354 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 EXTL3O43909 919 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 SNAP91O60641 907 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 CST8O60676 142 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 CDC14BO60729 498 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 PLA2G6O60733 806 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 CNOT3O75175 753 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 LRCH4O75427 683 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 RNASEH2AO75792 299 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 PIAS1O75925 651 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 RSL1D1O76021 490 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 SEC24DO94855 1032 aaPredicted RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 SORBS2O94875 1100 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 ABLIM3O94929 683 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 VNN1O95497 513 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 CPNE6O95741 557 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 HLA-DRAP01903 254 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 ALDOAP04075 364 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 PFKMP08237 780 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 IQCF3P0C7M6 154 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 GSTT2P0CG29 244 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 GSTT2BP0CG30 244 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 SMIM10L2AP0DMW4 78 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 SMIM10L2BP0DMW5 78 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 MLNP12872 115 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 KRT5P13647 590 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 ATP6V1B1P15313 513 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 ATF7P17544 494 aaPredicted RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 XRCC1P18887 633 aaPredicted RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 S100A1P23297 94 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 MYF6P23409 242 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 DNAJB1P25685 340 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 ACRV1P26436 265 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 IL1R2P27930 398 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 PIK3R1P27986 724 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 EPHA3P29320 983 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 YWHABP31946 246 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 GJC1P36383 396 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 GNL1P36915 607 aaPredicted RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 NPTX2P47972 431 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 SLC1A6P48664 564 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 PPM1FP49593 454 aaPredicted RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 NDST2P52849 883 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 BCAR1P56945 870 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 EIF3EP60228 445 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 MYL6P60660 151 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 ABCE1P61221 599 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 YWHAGP61981 247 aaKnown RBP eCLIP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 RPL7AP62424 266 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 MRPS22P82650 360 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 MRPS21P82921 87 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 COG7P83436 770 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 MS4A2Q01362 244 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 ROR1Q01973 937 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 SP3Q02447 781 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 TNFAIP2Q03169 654 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 ROM1Q03395 351 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 SREBF2Q12772 1141 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 SLC10A2Q12908 348 aaPredicted RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 TRAP1Q12931 704 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 RIN1Q13671 783 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 SIM2Q14190 667 aaPredicted RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 C16orf72Q14CZ0 275 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 OXA1LQ15070 435 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 STXBP2Q15833 593 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 LSM12Q3MHD2 195 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 NRN1LQ496H8 165 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 NHSL2Q5HYW2 709 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 TCHHL1Q5QJ38 904 aaPredicted RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 CELF3Q5SZQ8 465 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 ZNF362Q5T0B9 420 aaPredicted RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 GPR158Q5T848 1215 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 INTS11Q5TA45 600 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 KAZNQ674X7 775 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 SPOPLQ6IQ16 392 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 ANKRD26P1Q6NSI1 321 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 C8orf82Q6P1X6 216 aaPredicted RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 PCSK4Q6UW60 755 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 ABHD15Q6UXT9 468 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 HACD2Q6Y1H2 254 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 Q6ZPA2 131 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 CYP4V2Q6ZWL3 525 aaPredicted RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 GPR141Q7Z602 305 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 TTC30AQ86WT1 665 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 UNC45BQ8IWX7 931 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 UNC5BQ8IZJ1 945 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 NDUFAF2Q8N183 169 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 CENPSQ8N2Z9 138 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 GPD1LQ8N335 351 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 PPM1NQ8N819 430 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 FAM71DQ8N9W8 422 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 SLC4A11Q8NBS3 891 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 DDHD1Q8NEL9 900 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 RDM1Q8NG50 284 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 PNPT1Q8TCS8 783 aaKnown RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 CALML6Q8TD86 181 aa3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.44□□□□□ -1.86
CRNKL1-203ENST00000490258 NSUN6Q8TEA1 469 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms