RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 WASH6PQ9NQA3 447 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 IMP3Q9NV31 184 aaKnown RBP13.73□□□□□ -0.21
VTI1A-206ENST00000489142 PCDHGA4Q9Y5G9 962 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 PCDHGA3Q9Y5H0 932 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 BAHCC1Q9P281 2608 aa13.72□□□□□ -0.21
VTI1A-206ENST00000489142 OR51F1A6NGY5 319 aa13.72□□□□□ -0.21
VTI1A-206ENST00000489142 KRT86O43790 486 aa13.72□□□□□ -0.21
VTI1A-206ENST00000489142 AP2A1O95782 977 aa13.72□□□□□ -0.21
VTI1A-206ENST00000489142 IFNB1P01574 187 aa13.72□□□□□ -0.21
VTI1A-206ENST00000489142 C9P02748 559 aa13.72□□□□□ -0.21
VTI1A-206ENST00000489142 ITGALP20701 1170 aa13.72□□□□□ -0.21
VTI1A-206ENST00000489142 SH3BP2P78314 561 aa13.72□□□□□ -0.21
VTI1A-206ENST00000489142 PDE1BQ01064 536 aa13.72□□□□□ -0.21
VTI1A-206ENST00000489142 MC2RQ01718 297 aa13.72□□□□□ -0.21
VTI1A-206ENST00000489142 FOXM1Q08050 763 aa13.72□□□□□ -0.21
VTI1A-206ENST00000489142 PLCL1Q15111 1095 aa13.72□□□□□ -0.21
VTI1A-206ENST00000489142 TAS2R42Q7RTR8 314 aa13.72□□□□□ -0.21
VTI1A-206ENST00000489142 SLC13A5Q86YT5 568 aaPredicted RBP13.72□□□□□ -0.21
VTI1A-206ENST00000489142 CACNA2D3Q8IZS8 1091 aa13.72□□□□□ -0.21
VTI1A-206ENST00000489142 IL22RA1Q8N6P7 574 aa13.72□□□□□ -0.21
VTI1A-206ENST00000489142 OR52K1Q8NGK4 314 aa13.72□□□□□ -0.21
VTI1A-206ENST00000489142 LRRC45Q96CN5 670 aa13.72□□□□□ -0.21
VTI1A-206ENST00000489142 DCUN1D1Q96GG9 259 aa13.72□□□□□ -0.21
VTI1A-206ENST00000489142 ELMO2Q96JJ3 720 aa13.72□□□□□ -0.21
VTI1A-206ENST00000489142 C12orf66Q96MD2 445 aa13.72□□□□□ -0.21
VTI1A-206ENST00000489142 INSM2Q96T92 566 aaPredicted RBP13.72□□□□□ -0.21
VTI1A-206ENST00000489142 ASPSCR1Q9BZE9 553 aa13.72□□□□□ -0.21
VTI1A-206ENST00000489142 FASNP49327 2511 aaKnown RBP13.71□□□□□ -0.21
VTI1A-206ENST00000489142 PIEZO2Q9H5I5 2752 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 MGAT4DA6NG13 374 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.71□□□□□ -0.21
VTI1A-206ENST00000489142 ARHGAP6O43182 974 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 RAD1O60671 282 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 MTHFD1P11586 935 aaKnown RBP13.71□□□□□ -0.21
VTI1A-206ENST00000489142 LIFP15018 202 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 HADHAP40939 763 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 GRIA1P42261 906 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 ARCN1P48444 511 aaKnown RBP13.71□□□□□ -0.21
VTI1A-206ENST00000489142 ATP1A2P50993 1020 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 RAB15P59190 212 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 RPS6KA1Q15418 735 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 OASLQ15646 514 aaKnown RBP13.71□□□□□ -0.21
VTI1A-206ENST00000489142 BCL7AQ4VC05 210 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 MEI1Q5TIA1 1274 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 CACHD1Q5VU97 1274 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 METRNLQ641Q3 311 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 SNX20Q7Z614 316 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 SERPINA9Q86WD7 417 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 PIANPQ8IYJ0 282 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 CFAP206Q8IYR0 622 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 UNC5BQ8IZJ1 945 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 ZNF843Q8N446 348 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 GLIS1Q8NBF1 620 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 OR2L2Q8NH16 312 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 EXTL1Q92935 676 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 ULK4Q96C45 1275 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 RMDN2Q96LZ7 410 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 COPS8Q99627 209 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 NRTNQ99748 197 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 B3GNT4Q9C0J1 378 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 ETNK1Q9HBU6 452 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 NLE1Q9NVX2 485 aaPredicted RBP13.71□□□□□ -0.21
VTI1A-206ENST00000489142 SIDT1Q9NXL6 827 aaKnown RBP13.71□□□□□ -0.21
VTI1A-206ENST00000489142 FEZ2Q9UHY8 353 aaPredicted RBP13.71□□□□□ -0.21
VTI1A-206ENST00000489142 ZNF148Q9UQR1 794 aa13.71□□□□□ -0.21
VTI1A-206ENST00000489142 DNMT3AQ9Y6K1 912 aaPredicted RBP13.71□□□□□ -0.21
VTI1A-206ENST00000489142 AGAP14A8MT82 685 aa13.7□□□□□ -0.22
VTI1A-206ENST00000489142 TK2O00142 265 aa13.7□□□□□ -0.22
VTI1A-206ENST00000489142 POLR1CO15160 346 aaPredicted RBP13.7□□□□□ -0.22
VTI1A-206ENST00000489142 KCNJ13O60928 360 aa13.7□□□□□ -0.22
VTI1A-206ENST00000489142 ZNF189O75820 626 aaPredicted RBP13.7□□□□□ -0.22
VTI1A-206ENST00000489142 STK17BO94768 372 aa13.7□□□□□ -0.22
VTI1A-206ENST00000489142 ANKRD34CP0C6C1 535 aa13.7□□□□□ -0.22
VTI1A-206ENST00000489142 SLC35G4P0C7Q5 338 aa13.7□□□□□ -0.22
VTI1A-206ENST00000489142 ZSCAN5DPP0CG00 497 aa13.7□□□□□ -0.22
VTI1A-206ENST00000489142 ATP1B2P14415 290 aaPredicted RBP13.7□□□□□ -0.22
VTI1A-206ENST00000489142 ZNF28P17035 718 aa13.7□□□□□ -0.22
VTI1A-206ENST00000489142 ACRV1P26436 265 aa13.7□□□□□ -0.22
VTI1A-206ENST00000489142 LMAN1P49257 510 aa13.7□□□□□ -0.22
VTI1A-206ENST00000489142 PRLHRP49683 370 aa13.7□□□□□ -0.22
VTI1A-206ENST00000489142 KCNAB1Q14722 419 aa13.7□□□□□ -0.22
VTI1A-206ENST00000489142 CEACAM20Q6UY09 585 aa13.7□□□□□ -0.22
VTI1A-206ENST00000489142 CERS6Q6ZMG9 384 aa13.7□□□□□ -0.22
VTI1A-206ENST00000489142 TIPARPQ7Z3E1 657 aaKnown RBP13.7□□□□□ -0.22
VTI1A-206ENST00000489142 RBM12BQ8IXT5 1001 aaKnown RBP13.7□□□□□ -0.22
VTI1A-206ENST00000489142 CLDN19Q8N6F1 224 aa13.7□□□□□ -0.22
VTI1A-206ENST00000489142 CDKN2AIPNLQ96HQ2 116 aa13.7□□□□□ -0.22
VTI1A-206ENST00000489142 ZNF514Q96K75 400 aaPredicted RBP13.7□□□□□ -0.22
VTI1A-206ENST00000489142 OR6C1Q96RD1 312 aa13.7□□□□□ -0.22
VTI1A-206ENST00000489142 FBXO8Q9NRD0 319 aa13.7□□□□□ -0.22
VTI1A-206ENST00000489142 ZDHHC3Q9NYG2 299 aa13.7□□□□□ -0.22
VTI1A-206ENST00000489142 SLC2A6Q9UGQ3 507 aa13.7□□□□□ -0.22
VTI1A-206ENST00000489142 PILRAQ9UKJ1 303 aa13.7□□□□□ -0.22
VTI1A-206ENST00000489142 CFAP46Q8IYW2 2715 aa13.7□□□□□ -0.22
VTI1A-206ENST00000489142 CFAP99D6REC4 459 aa13.69□□□□□ -0.22
VTI1A-206ENST00000489142 CCDC175P0C221 793 aa13.69□□□□□ -0.22
VTI1A-206ENST00000489142 RALBP11234 206 aa13.69□□□□□ -0.22
VTI1A-206ENST00000489142 PREPP48147 710 aa13.69□□□□□ -0.22
VTI1A-206ENST00000489142 CCZ1BP86790 482 aa13.69□□□□□ -0.22
VTI1A-206ENST00000489142 CCZ1P86791 482 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms