RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 DDA1Q9BW61 102 aa24.48■■□□□ 1.51
HMGN1-217ENST00000489072 FAM8A1Q9UBU6 413 aa24.48■■□□□ 1.51
HMGN1-217ENST00000489072 CFAP46Q8IYW2 2715 aa24.47■■□□□ 1.51
HMGN1-217ENST00000489072 CCDC78A2IDD5 438 aa24.47■■□□□ 1.51
HMGN1-217ENST00000489072 AMD1P17707 334 aa24.47■■□□□ 1.51
HMGN1-217ENST00000489072 FDFT1P37268 417 aa24.47■■□□□ 1.51
HMGN1-217ENST00000489072 GPR33Q49SQ1 333 aa24.47■■□□□ 1.51
HMGN1-217ENST00000489072 ZRANB3Q5FWF4 1079 aa24.47■■□□□ 1.51
HMGN1-217ENST00000489072 PCSK4Q6UW60 755 aa24.47■■□□□ 1.51
HMGN1-217ENST00000489072 LINC00523Q86TU6 105 aa24.47■■□□□ 1.51
HMGN1-217ENST00000489072 LILRA3Q8N6C8 439 aaPredicted RBP24.47■■□□□ 1.51
HMGN1-217ENST00000489072 STYXQ8WUJ0 223 aa24.47■■□□□ 1.51
HMGN1-217ENST00000489072 CDKN2AIPNLQ96HQ2 116 aa24.47■■□□□ 1.51
HMGN1-217ENST00000489072 LINC00615Q96LM1 132 aaPredicted RBP24.47■■□□□ 1.51
HMGN1-217ENST00000489072 C9orf72Q96LT7 481 aa24.47■■□□□ 1.51
HMGN1-217ENST00000489072 COPS8Q99627 209 aa24.47■■□□□ 1.51
HMGN1-217ENST00000489072 WWP1Q9H0M0 922 aa24.47■■□□□ 1.51
HMGN1-217ENST00000489072 PPP2R2CQ9Y2T4 447 aa24.47■■□□□ 1.51
HMGN1-217ENST00000489072 PIEZO2Q9H5I5 2752 aa24.47■■□□□ 1.51
HMGN1-217ENST00000489072 IGLV3-16A0A075B6K0 115 aa24.46■■□□□ 1.51
HMGN1-217ENST00000489072 MROH6A6NGR9 719 aa24.46■■□□□ 1.51
HMGN1-217ENST00000489072 ERI2A8K979 691 aaKnown RBP24.46■■□□□ 1.51
HMGN1-217ENST00000489072 ATXN7O15265 892 aaPredicted RBP24.46■■□□□ 1.51
HMGN1-217ENST00000489072 SUN1O94901 812 aa24.46■■□□□ 1.51
HMGN1-217ENST00000489072 PSMA3P25788 255 aa24.46■■□□□ 1.51
HMGN1-217ENST00000489072 GRIA1P42261 906 aa24.46■■□□□ 1.51
HMGN1-217ENST00000489072 CAPZBP47756 277 aa24.46■■□□□ 1.51
HMGN1-217ENST00000489072 LEPRP48357 1165 aaKnown RBP24.46■■□□□ 1.51
HMGN1-217ENST00000489072 PRLHRP49683 370 aa24.46■■□□□ 1.51
HMGN1-217ENST00000489072 MC2RQ01718 297 aa24.46■■□□□ 1.51
HMGN1-217ENST00000489072 CCDC38Q502W7 563 aa24.46■■□□□ 1.51
HMGN1-217ENST00000489072 ANKS6Q68DC2 871 aa24.46■■□□□ 1.51
HMGN1-217ENST00000489072 VASH2Q86V25 355 aa24.46■■□□□ 1.51
HMGN1-217ENST00000489072 SERPINA9Q86WD7 417 aa24.46■■□□□ 1.51
HMGN1-217ENST00000489072 PIANPQ8IYJ0 282 aa24.46■■□□□ 1.51
HMGN1-217ENST00000489072 JPH3Q8WXH2 748 aaPredicted RBP24.46■■□□□ 1.51
HMGN1-217ENST00000489072 TGM7Q96PF1 710 aa24.46■■□□□ 1.51
HMGN1-217ENST00000489072 INSM2Q96T92 566 aaPredicted RBP24.46■■□□□ 1.51
HMGN1-217ENST00000489072 ZDHHC3Q9NYG2 299 aa24.46■■□□□ 1.51
HMGN1-217ENST00000489072 CFAP20Q9Y6A4 193 aaKnown RBP24.46■■□□□ 1.51
HMGN1-217ENST00000489072 CAPN5O15484 640 aaPredicted RBP24.45■■□□□ 1.5
HMGN1-217ENST00000489072 ANKRD34CP0C6C1 535 aa24.45■■□□□ 1.5
HMGN1-217ENST00000489072 ZSCAN5DPP0CG00 497 aa24.45■■□□□ 1.5
HMGN1-217ENST00000489072 RALBP11234 206 aa24.45■■□□□ 1.5
HMGN1-217ENST00000489072 MTHFD1P11586 935 aaKnown RBP24.45■■□□□ 1.5
HMGN1-217ENST00000489072 ATP1B2P14415 290 aaPredicted RBP24.45■■□□□ 1.5
HMGN1-217ENST00000489072 ACRV1P26436 265 aa24.45■■□□□ 1.5
HMGN1-217ENST00000489072 CDH17Q12864 832 aa24.45■■□□□ 1.5
HMGN1-217ENST00000489072 SEMA5AQ13591 1074 aa24.45■■□□□ 1.5
HMGN1-217ENST00000489072 CCNG2Q16589 344 aa24.45■■□□□ 1.5
HMGN1-217ENST00000489072 DUS1LQ6P1R4 473 aaKnown RBP24.45■■□□□ 1.5
HMGN1-217ENST00000489072 SPDYE1Q8NFV5 336 aaPredicted RBP24.45■■□□□ 1.5
HMGN1-217ENST00000489072 TRIM58Q8NG06 486 aa24.45■■□□□ 1.5
HMGN1-217ENST00000489072 HEXDCQ8WVB3 486 aa24.45■■□□□ 1.5
HMGN1-217ENST00000489072 CTRCQ99895 268 aa24.45■■□□□ 1.5
HMGN1-217ENST00000489072 APMAPQ9HDC9 416 aa24.45■■□□□ 1.5
HMGN1-217ENST00000489072 RAB6BQ9NRW1 208 aa24.45■■□□□ 1.5
HMGN1-217ENST00000489072 IMP3Q9NV31 184 aaKnown RBP24.45■■□□□ 1.5
HMGN1-217ENST00000489072 SIDT1Q9NXL6 827 aaKnown RBP24.45■■□□□ 1.5
HMGN1-217ENST00000489072 KLHL33A6NCF5 533 aa24.44■■□□□ 1.5
HMGN1-217ENST00000489072 CFAP99D6REC4 459 aa24.44■■□□□ 1.5
HMGN1-217ENST00000489072 STMND1H3BQB6 276 aa24.44■■□□□ 1.5
HMGN1-217ENST00000489072 KIF1CO43896 1103 aaKnown RBP24.44■■□□□ 1.5
HMGN1-217ENST00000489072 FGGP02679 453 aa24.44■■□□□ 1.5
HMGN1-217ENST00000489072 RAB15P59190 212 aa24.44■■□□□ 1.5
HMGN1-217ENST00000489072 DCAF12Q5T6F0 453 aa24.44■■□□□ 1.5
HMGN1-217ENST00000489072 KIAA1614Q5VZ46 1190 aa24.44■■□□□ 1.5
HMGN1-217ENST00000489072 TAS2R42Q7RTR8 314 aa24.44■■□□□ 1.5
HMGN1-217ENST00000489072 DNAAF3Q8N9W5 541 aa24.44■■□□□ 1.5
HMGN1-217ENST00000489072 RMDN2Q96LZ7 410 aa24.44■■□□□ 1.5
HMGN1-217ENST00000489072 ASPSCR1Q9BZE9 553 aa24.44■■□□□ 1.5
HMGN1-217ENST00000489072 ACSL5Q9ULC5 683 aa24.44■■□□□ 1.5
HMGN1-217ENST00000489072 OR51F1A6NGY5 319 aa24.43■■□□□ 1.5
HMGN1-217ENST00000489072 POLBP06746 335 aa24.43■■□□□ 1.5
HMGN1-217ENST00000489072 WT1P19544 449 aaPredicted RBP24.43■■□□□ 1.5
HMGN1-217ENST00000489072 RPL22P35268 128 aaKnown RBP24.43■■□□□ 1.5
HMGN1-217ENST00000489072 PPP1CAP62136 330 aa24.43■■□□□ 1.5
HMGN1-217ENST00000489072 RHDQ02161 417 aa24.43■■□□□ 1.5
HMGN1-217ENST00000489072 CACNG1Q06432 222 aa24.43■■□□□ 1.5
HMGN1-217ENST00000489072 DBN1Q16643 649 aa24.43■■□□□ 1.5
HMGN1-217ENST00000489072 ZNF658BQ4V348 819 aaPredicted RBP24.43■■□□□ 1.5
HMGN1-217ENST00000489072 MANEAQ5SRI9 462 aa24.43■■□□□ 1.5
HMGN1-217ENST00000489072 DRICH1Q6PGQ1 229 aaPredicted RBP24.43■■□□□ 1.5
HMGN1-217ENST00000489072 PPP1R21Q6ZMI0 780 aa24.43■■□□□ 1.5
HMGN1-217ENST00000489072 CFAP206Q8IYR0 622 aa24.43■■□□□ 1.5
HMGN1-217ENST00000489072 CCDC89Q8N998 374 aa24.43■■□□□ 1.5
HMGN1-217ENST00000489072 HM13Q8TCT9 377 aa24.43■■□□□ 1.5
HMGN1-217ENST00000489072 C12orf66Q96MD2 445 aa24.43■■□□□ 1.5
HMGN1-217ENST00000489072 FBXO8Q9NRD0 319 aa24.43■■□□□ 1.5
HMGN1-217ENST00000489072 PAK5Q9P286 719 aa24.43■■□□□ 1.5
HMGN1-217ENST00000489072 EPHA6Q9UF33 1036 aa24.43■■□□□ 1.5
HMGN1-217ENST00000489072 PCDHB11Q9Y5F2 797 aa24.43■■□□□ 1.5
HMGN1-217ENST00000489072 E7EVH7 732 aa24.42■■□□□ 1.5
HMGN1-217ENST00000489072 ERVH48-1M5A8F1 160 aa24.42■■□□□ 1.5
HMGN1-217ENST00000489072 CXCR5P32302 372 aa24.42■■□□□ 1.5
HMGN1-217ENST00000489072 LMAN1P49257 510 aa24.42■■□□□ 1.5
HMGN1-217ENST00000489072 SKIDA1Q1XH10 827 aa24.42■■□□□ 1.5
HMGN1-217ENST00000489072 CLDN19Q8N6F1 224 aa24.42■■□□□ 1.5
HMGN1-217ENST00000489072 OR13J1Q8NGT2 312 aa24.42■■□□□ 1.5
HMGN1-217ENST00000489072 SLC39A7Q92504 469 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms