RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 CCL4P13236 92 aa15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 TPSB2P20231 275 aa15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 SESN2P58004 480 aaPredicted RBP15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 CRADDP78560 199 aa15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 KCNJ11Q14654 390 aa15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 TPSAB1Q15661 275 aa15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 PCID2Q5JVF3 399 aa15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 NLRP9Q7RTR0 991 aa15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 ARHGAP22Q7Z5H3 698 aa15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 SPDYE1Q8NFV5 336 aaPredicted RBP15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 NCSTNQ92542 709 aa15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 AHCYL2Q96HN2 611 aaKnown RBP15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 INSM2Q96T92 566 aaPredicted RBP15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 NAP1L3Q99457 506 aaPredicted RBP15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 EPB41L1Q9H4G0 881 aa15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 CHRAC1Q9NRG0 131 aa15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 TREX1Q9NSU2 369 aa15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 PISDQ9UG56 409 aa15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 ACSL5Q9ULC5 683 aa15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 PRSS21Q9Y6M0 314 aa15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 KIF26BQ2KJY2 2108 aa15.62■□□□□ 0.09
CTDSP1-209ENST00000488627 NVLO15381 856 aaKnown RBP15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 C9P02748 559 aa15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 JMJD7P0C870 316 aa15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 FGF3P11487 239 aaPredicted RBP15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 SLC5A2P31639 672 aa15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 HALP42357 657 aa15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 NPY2RP49146 381 aa15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 VPS41P49754 854 aa15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 PCBP4P57723 403 aaKnown RBP15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 GPS1Q13098 491 aa15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 GPR18Q14330 331 aa15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 ITIH4Q14624 930 aa15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 PAPD7Q5XG87 772 aaKnown RBP15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 CAPRIN2Q6IMN6 1127 aaKnown RBP15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 LRRC8BQ6P9F7 803 aa15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 CCDC137Q6PK04 289 aaKnown RBP15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 PACS1Q6VY07 963 aa15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 TRIM48Q8IWZ4 208 aa15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 RBM12BQ8IXT5 1001 aaKnown RBP15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 CFAP206Q8IYR0 622 aa15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 ZNF248Q8NDW4 579 aa15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 GPR150Q8NGU9 434 aa15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 HM13Q8TCT9 377 aa15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 CXorf40BQ96DE9 158 aa15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 CCM2Q9BSQ5 444 aa15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 WWP1Q9H0M0 922 aa15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 ACSL6Q9UKU0 697 aa15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 SSUH2Q9Y2M2 353 aa15.61■□□□□ 0.09
CTDSP1-209ENST00000488627 FANCGO15287 622 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 RRP8O43159 456 aaKnown RBP15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 PHF2O75151 1096 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 UBXN7O94888 489 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 AP2A2O94973 939 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 POLBP06746 335 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 MTHFD1P11586 935 aaKnown RBP15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 NSG1P42857 185 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 MAPK9P45984 424 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 CCDC173Q0VFZ6 552 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 SEMA3AQ14563 771 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 GSE1Q14687 1217 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 COL28A1Q2UY09 1125 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 ANKRD22Q5VYY1 191 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 AFTPHQ6ULP2 937 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 SPACA3Q8IXA5 215 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 AGBL5Q8NDL9 886 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 OR4L1Q8NH43 312 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 CPT1BQ92523 772 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 USP7Q93009 1102 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 RMDN2Q96LZ7 410 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 KIFC1Q9BW19 673 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 IL22Q9GZX6 179 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 BFARQ9NZS9 450 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 FAM8A1Q9UBU6 413 aa15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 CFAP20Q9Y6A4 193 aaKnown RBP15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 DSPP15924 2871 aaKnown RBP15.6■□□□□ 0.09
CTDSP1-209ENST00000488627 C9orf172C9J069 976 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 AP3B1O00203 1094 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 OR1I1O60431 355 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 AVILO75366 819 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 TYRP1P17643 537 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 TCP1P17987 556 aaKnown RBP15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 MGAT1P26572 445 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 ARNTP27540 789 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 NMBRP28336 390 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 FNTAP49354 379 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 GFERP55789 205 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 GNG11P61952 73 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 TLE3Q04726 772 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 CAND1Q86VP6 1230 aaKnown RBP15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 CREG2Q8IUH2 290 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 PLXDC1Q8IUK5 500 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 BMPERQ8N8U9 685 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 PPHLN1Q8NEY8 458 aaKnown RBP15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 OR6P1Q8NGX9 317 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 RSC1A1Q92681 617 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 CRELD1Q96HD1 420 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 NAF1Q96HR8 494 aaKnown RBP15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 B3GNT4Q9C0J1 378 aa15.59■□□□□ 0.09
CTDSP1-209ENST00000488627 OR52A5Q9H2C5 316 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms